Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01894 ATGGCCCGTAGATTAAAGTCCCACGCCTACCTAGAAGAGCCTGAACCCGATCTCACCCCAGAAACCATGCCGGAATCTCCCTCCTCCGGTGATGACGCAAAAACAGAAGCGCCCTCACCCAAAAAAAGAAAAGGGATGCAGAAGAGGGTGGTCACGGTACCGATCAGTGACGTGGAGGGATCTAAGAGCAAAGGCGAGACGCCTCCACCGGCGGATTCTTGGGCCTGGAGGAAATATGGCCAGAAGCCCATCAAAGGGTCTCCTTATCCAAGGGGATACTACCGATGTAGCAGTTCCAAGGGGTGCCCCGCCAGGAAACAAGTAGAGAGATGCCGTGAGGACCCCACAAAGCTTACCGTCAACTACGCTAACGAACACAACCACTCCATGCCTATCGGTAAGTCCCACTCCTCCTCCGCTGCCACCGATGCAACCGCCGCGGCCACTCCGACCACATCAAGCGACGGCGCTGCTACCTCTACCACCGAGTCCGCGGACAGATTACCACCGGAAGAGCTGACTGTCTTCGCGAGCGATTCCGATGTAGAACTCGCCGGCGACTCGGTGGTTCTGCTTAGCGACCGATTTGGATGGTTCATTGATGTGGTTTCTACAAGCGTTCTGGAAAGCCCGATTTGCGGGGAGGTAGAGTATGTGGCTTCGACGATTGGGGAGGAGGATGAGTCGCTATTTGCCGACCTCGGCGAGTTGCCGGAGTGTTCGACGGTTTTCCGGCGTAGGAATATTCTGAGCTCGAGCGCGATCCAGTGTCGTGGTATCACATTCACAGGATA 794 0.5605 MARRLKSHAYLEEPEPDLTPETMPESPSSGDDAKTEAPSPKKRKGMQKRVVTVPISDVEGSKSKGETPPPADSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERCREDPTKLTVNYANEHNHSMPIGKSHSSSAATDATAAATPTTSSDGAATSTTESADRLPPEELTVFASDSDVELAGDSVVLLSDRFGWFIDVVSTSVLESPICGEVEYVASTIGEEDESLFADLGELPECSTVFRRRNILSSSAIQCRGITFTG 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01894 264 Gene3D WRKY domain 56 132 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva07g01894 264 Pfam WRKY DNA -binding domain 72 128 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva07g01894 264 MobiDBLite consensus disorder prediction 1 15 - -
Bva07g01894 264 ProSiteProfiles WRKY domain profile. 65 131 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva07g01894 264 MobiDBLite consensus disorder prediction 1 90 - -
Bva07g01894 264 MobiDBLite consensus disorder prediction 127 167 - -
Bva07g01894 264 PANTHER OS01G0750100 PROTEIN 18 250 - -
Bva07g01894 264 SUPERFAMILY WRKY DNA-binding domain 66 131 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva07g01894 264 SMART WRKY_cls 70 130 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva07g01894 264 MobiDBLite consensus disorder prediction 127 169 - -
Bva07g01894 264 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 18 250 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01894 Bva-Chr7 16970800 16973155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01894 21 249 WRKY Transcription Factor Family AT3G58710 51.915 6.55e-72 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva07g01894 WRKY 1.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01894 - - gmx:100170680 335.109