Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01891 ATGAACGACACCATCAACAATCCTGCGACGCATTTGCCGGGGCTATGGCGAACTAGTGTTACGACCTATGAAGCCCGTATTAACAGTAATAGTGACTCCTATGAGATGGCTGTGTTGTACTCATCACGTTCCTTCCAGTTCCAACACAATAATCTTGATGACTGGTCAGCTGCACAGGATCCACAGAGGATGGTGAGAGATAGAAGGCCTTCAGGACTCAACACCATACCTAAGCCACAAAGAATTCATGCCGTTAATGGTGCCATGGGAAGTGGTTTGAACCCATGGATCTTTGGGATTGTCCAACAATCACATCCAAGATCCAGACGCCAAACAAACATGCAAGCTCCTACAGAAGCATCAAATTTCAGATCAACAGTGTTGGGTAAGCTCAAGAAAGAAGTCTTCAAGGGGAAGCAGTTCTCAAACAAGAAGAACAATGCAGCAAATAAATCAGAAGAGGAGCGGAAAGAGAAGGATAAGGATGAAGATGGTAAGAGATGTGCTGTTTGCTTGGAAGACTTTGAACCTAAAGAGGAAGTGATGCTCACTCCATGCAACCATATCTTTCATGAAGATTGCATAGTGCCTTGGCTTACAAGTAATGGTCACTGCCCTGTGTGTAGGTTTGTTATTTgtgagagggagagagaaaacaTCAACGAAAGTGGGAATATAACGCATGCACAAGAGCTTTCCTCATGGTTCGGGGACATGGAGTA 722 0.4321 MNDTINNPATHLPGLWRTSVTTYEARINSNSDSYEMAVLYSSRSFQFQHNNLDDWSAAQDPQRMVRDRRPSGLNTIPKPQRIHAVNGAMGSGLNPWIFGIVQQSHPRSRRQTNMQAPTEASNFRSTVLGKLKKEVFKGKQFSNKKNNAANKSEEERKEKDKDEDGKRCAVCLEDFEPKEEVMLTPCNHIFHEDCIVPWLTSNGHCPVCRFVICERERENINESGNITHAQELSSWFGDME 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01891 240 ProSiteProfiles Zinc finger RING-type profile. 168 209 IPR001841 -
Bva07g01891 240 CDD RING-H2_PA-TM-RING 168 209 - -
Bva07g01891 240 Pfam Ring finger domain 167 209 IPR001841 -
Bva07g01891 240 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 6 221 - -
Bva07g01891 240 MobiDBLite consensus disorder prediction 139 160 - -
Bva07g01891 240 SUPERFAMILY RING/U-box 158 215 - -
Bva07g01891 240 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 6 221 - -
Bva07g01891 240 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 128 213 IPR013083 -
Bva07g01891 240 SMART ring_2 168 208 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01891 Bva-Chr7 16956487 16957673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01891 99 225 C3H Transcription Factor Family AT3G58720 38.235 6.07e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01891 - - aip:107630161 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01891 07 16956487 16957673 Bva07g01891 07 16956487 16957673 ECH