Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01879 ATGGGGAAGAAGAATAACATTTTCTGTTATGCAGATGGGGTGGACAAGTTGCTGATGTTTTTTGGGACATTGGGATGTCTTGGAGATGGGCTGCAAAACCCTCTCGTGATGTACATTCTTAGTGATGTGATCAACGCCTATGGAAACAAGAACAGCGGTTTGTCACAAGACGATGTGAACAAGTATGCACTTAGGCTTTTCTTGGCTGCAATTGGAGTTGGACTTTCTGCTTTTGTTGAAGGAATATGTTGGACAAGAACTGCCGAGAGACAAACTTCCAGAATGAGAATGGAATACCTAAAATCAGTTCTTAGACAAGAAGTAGGTTTCTATGACACACAAACGGCTGGTTCTTCAACAACCTTCCAAGTTGTCTCACTTATCTCTTCTGATGCCAATACAATCCAAGTTGCCTTGTGTGAAAAGATACCTGACTGCATGGCTTACATGTCAACATTTCTCTTCTGCCACATCTTTGCCTTTGTTCTGTCATGGAGGCTTACTTTGGCAGCCATACCACTCTCAATCATGTTCATTTTTCCTGCTCTTGTATTCGGGAAGATCATGTTGAATCtcataatgaaaatgattgaatCTTATGGGGTTGCCGGAGGGATTGCAGAACAAGCAATTTCTTCAGTAAGGACTGTTTATTCTTATGTAGGGGAACGTCAAACTCTAGAGAGATTTAGCAGTGCACTTGAAAAGACTATGGAGCTTGGAATAAAGCAAGGTTTTGCAAAGGGGTTGATGTTAGGAAGCTTgggagttatatatataagttggGGTTTTCAGGCTTGGGTTGGAACTTACTTGATTACTGACAAAGGAGAAGAGGGTGGCCATGTATTTGTAGCTGGCTTCAATGTTCTCATGGGAGGCCTGAGTGTTTTAAGCGCACTACCAAATTTAACTGCTATCACAGAGGCAACTGCTGCTGTGAACCGTCTCTTTGAAATGATTGATAGGGTGCCAAGTATAGATTCTGAagatagaaaaggaaaggctTTATCACATGTGAGAGGAGAAGTTCAATTTCAAGACATCTACTTTTGTTATCCATCAAGGCCAGATACACTCATCTTGCAAGGCTTCAATCTTATGATTCCAGCAGGCAAGAAAGTTGGCCTTGTGGGAGGTAGTGGTTCAGGAAAATCCACTGTCATTGCACTGCTTGAGAGATTTTATGATCCTGTTGAGGGGGAAATACTCTTGGATGGCCACAAGATTAGCAGACTTCAACTGAAATGGTTGAGATCCCAACTTGGGCTAGTAAACCAAGAGCCAGTTCTTTTTGCCACATccataaaagagaatatattgTTTGGAAAAGAAGGGGCTTCAATGGATGATGTGATAAATGCAGCTAAAGCAGCAAATGCACATGATTTCATTGTCAAGCTGACAGAAGGATATGAAACTCAAGTGGGGCAGTTTGGATTCCAATTGTCTGGAGGGCAGAAGCAGAGAATTGCCATAGCAAGAGCTTTGCTTAGGGATCCTAAGATTCTGCTGCTTGATGAAGCCACTAGTGCACTGGATGCACAATCCGAGAGAGTGGTGCAGGCAGCAATTGATCAGGCTTCAAAAGGAAGAACAACTATCATCATTGCTCATCGTCTGTCTACAATACAAACAGCTCAACTCATTGCAGTTATTCAAGCTGGTAAAGTTATTGAATCTGGTACTCACAACCAGTTGATGGAAATGAATGATGGACAAGGTGGGGAATATGCTCGGATGGTAGAGTTGCAGCAAGTAACAGCAGCACAAAATGAAGAACCCAGAAATCCCAATTTTCAAATGGATGGAAATGGAAGGAATGTCCACAGGATGAGCGTTCCACAAAGCCCAGCAGTAAGTTTCAGATCAAGCACACAAGGCACCCCGGTATTATATCCCTTTAGCCAGGCATTTTCTGTTGGCACCCCCTACTCCTATTCCATCCAATATGACCCTGATGAGGATAGTTATGAAGATAACTTGAAAAGATCAGCTTATCCTGCTCCTTCCCAGTGGCGTTTGCTGAAAATGAATGCACCGGAGTGGGGAAGTGCAATGCTTGGATGTTTGGGTGCAATAGGCTCAGGAGCAGTACAACCGGTAAATGCATACTGTGTGGGAACACTTATATCAGTTTATTTTGATCCTAACGATATCAAGTCTAAAACTCGAGTCCTGGCCCTCATTTTCTTAGCAATCGGTGTTTTTAACTTCTTAACAAGTATTCTTCAGCACTATAGTTTTGCAGTTATGGGAGAAAGATTGACTAAAAGGGTAAGAGAGAAACTAGTTGAAAAGCTCTTGACTTTTGAGATAGGGTGGTTTGATAATGAAGAGAACACCAGTGCAGCCATTTGTGCAAGATTAGCTTCTGAAGCAAACACGGTTCGCTCCCTTGTTGGGGACCGAATGTCACTGTTGGCCCAAGCAATCTTTGGGTCTATCTTTGCTTACACACTGGGACTAGTACTCACATGGAGGCTTACTCTTGTGATGATTGCAGTGCAGCCATTAGTGATTGGGAGCTTTTACTCGAGAAGTGTCCTGATGAAGAGTATGGCAGAAAAAGCCCGGAAAGCACAAAAGGAAGGAAGCCAACTCGCTAGTGAAGCTGTTATAAACCATAGAACCATAACTGCCTTCAGTTCTCAGAAAAGAATGTTGGCTCTCTTCAAATCTACAATGGTAGGCCCTAAAAAGGAAAGTGTTAGACAGTCATGGATTTCTGGTATTGGTCTTTTCAGCTCCCAATTTTTCAACACTGCATCAACAGCCTTGGCTTACTGGTATGGTGGGAAGCTTCTGATACAAGGGCTCATAGAACCAAAGCATCTCTTTCAAGCATTCTTAATATTGCTTTTCACTGCATATATCATTGCAGAAGCTGGAAGCATGACTTCTGACTTATCTAAAGGAAGCAGCGCAGTTAGATCAGTTTTTGCTATCTTAGACAGGAAAACTGAGATTGATCCTGATATCTCATGGGGAGTggacacaaaaaagaaaataaggggCAAAGTTGAGCTTAAACATGTTTTCTTTGCATATCCAGCTAGACCTGATCAGATGATATTCAAGGGTCTGTGTCTGAAAATTGAGGCTGGAAGAACAATGGCACTAGTGGGACATAGCGGTTGTGGTAAATCAACTATCATTGGCCTTATTGAGAGGTTTTATGATCCTGTGAAGGGAACAATCTCCATAGATGACCAAGACATCAAGGCATATAATCTGAGAACACTAAGGTCGCATATTGCATTAGTAAGTCAGGAACCTACCCTCTTTGCTGGAACCATTAAAGCAAACATTGCCTATGGGAAAGAAAAGGCCACTGAATCTGAGATAAGAAGAGCTGCATCTCTGGCTAATGCTCATGAATTTATAAGTGGTATGAAAGATGGTTATGACACATACTGTGGAGAAAGAGGAGTTCAGCTCTCGGGAGGTCAGAAACAAAGAATAGCTTTGGCTCGTGCAATGCTGAAGAATCCTGCAATCCTCCTTCTGGACGAGGCTACAAGTGCACTTGATAGTGTGTCAGAGAGCATGGTTCAAGAAGCACTGGAGAAAATGATGGTTGGCAGAACATGCATTGTGGTGGCTCACAGGCTATCCACCATACAGAAATCCAACTCCATTGCTGTGATTAAGAATGGCAAGGTTGTGGAACAAGGCTCACATAATGAACTGATTTCCTTGGGAGGTGATGGAGCATACCATTCTCTGattaagcttcaaagtggcaGCACCCATAGAAGGTA 3764 0.4145 MGKKNNIFCYADGVDKLLMFFGTLGCLGDGLQNPLVMYILSDVINAYGNKNSGLSQDDVNKYALRLFLAAIGVGLSAFVEGICWTRTAERQTSRMRMEYLKSVLRQEVGFYDTQTAGSSTTFQVVSLISSDANTIQVALCEKIPDCMAYMSTFLFCHIFAFVLSWRLTLAAIPLSIMFIFPALVFGKIMLNLIMKMIESYGVAGGIAEQAISSVRTVYSYVGERQTLERFSSALEKTMELGIKQGFAKGLMLGSLGVIYISWGFQAWVGTYLITDKGEEGGHVFVAGFNVLMGGLSVLSALPNLTAITEATAAVNRLFEMIDRVPSIDSEDRKGKALSHVRGEVQFQDIYFCYPSRPDTLILQGFNLMIPAGKKVGLVGGSGSGKSTVIALLERFYDPVEGEILLDGHKISRLQLKWLRSQLGLVNQEPVLFATSIKENILFGKEGASMDDVINAAKAANAHDFIVKLTEGYETQVGQFGFQLSGGQKQRIAIARALLRDPKILLLDEATSALDAQSERVVQAAIDQASKGRTTIIIAHRLSTIQTAQLIAVIQAGKVIESGTHNQLMEMNDGQGGEYARMVELQQVTAAQNEEPRNPNFQMDGNGRNVHRMSVPQSPAVSFRSSTQGTPVLYPFSQAFSVGTPYSYSIQYDPDEDSYEDNLKRSAYPAPSQWRLLKMNAPEWGSAMLGCLGAIGSGAVQPVNAYCVGTLISVYFDPNDIKSKTRVLALIFLAIGVFNFLTSILQHYSFAVMGERLTKRVREKLVEKLLTFEIGWFDNEENTSAAICARLASEANTVRSLVGDRMSLLAQAIFGSIFAYTLGLVLTWRLTLVMIAVQPLVIGSFYSRSVLMKSMAEKARKAQKEGSQLASEAVINHRTITAFSSQKRMLALFKSTMVGPKKESVRQSWISGIGLFSSQFFNTASTALAYWYGGKLLIQGLIEPKHLFQAFLILLFTAYIIAEAGSMTSDLSKGSSAVRSVFAILDRKTEIDPDISWGVDTKKKIRGKVELKHVFFAYPARPDQMIFKGLCLKIEAGRTMALVGHSGCGKSTIIGLIERFYDPVKGTISIDDQDIKAYNLRTLRSHIALVSQEPTLFAGTIKANIAYGKEKATESEIRRAASLANAHEFISGMKDGYDTYCGERGVQLSGGQKQRIALARAMLKNPAILLLDEATSALDSVSESMVQEALEKMMVGRTCIVVAHRLSTIQKSNSIAVIKNGKVVEQGSHNELISLGGDGAYHSLIKLQSGSTHRR 1254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01879 1254 Gene3D - 998 1253 IPR027417 -
Bva07g01879 1254 CDD ABC_6TM_Pgp_ABCB1_D2_like 676 990 - -
Bva07g01879 1254 ProSitePatterns ABC transporters family signature. 1147 1161 IPR017871 GO:0005524
Bva07g01879 1254 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 20 309 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva07g01879 1254 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 12 1248 - -
Bva07g01879 1254 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 688 972 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva07g01879 1254 Pfam ABC transporter 362 511 IPR003439 GO:0005524
Bva07g01879 1254 Gene3D ABC transporter type 1, transmembrane domain 634 994 IPR036640 GO:0005524|GO:0016021
Bva07g01879 1254 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 335 585 IPR027417 -
Bva07g01879 1254 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 344 580 IPR003439 GO:0005524
Bva07g01879 1254 ProSitePatterns ABC transporters family signature. 483 497 IPR017871 GO:0005524
Bva07g01879 1254 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1008 1244 IPR003439 GO:0005524
Bva07g01879 1254 Gene3D ABC transporter type 1, transmembrane domain 7 589 IPR036640 GO:0005524|GO:0016021
Bva07g01879 1254 CDD ABC_MTABC3_MDL1_MDL2 1008 1247 - -
Bva07g01879 1254 SMART AAA_5 371 563 IPR003593 -
Bva07g01879 1254 SMART AAA_5 1035 1227 IPR003593 -
Bva07g01879 1254 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 12 1248 IPR039421 -
Bva07g01879 1254 CDD ABC_MTABC3_MDL1_MDL2 344 585 - -
Bva07g01879 1254 Pfam ABC transporter 1027 1175 IPR003439 GO:0005524
Bva07g01879 1254 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1003 1247 IPR027417 -
Bva07g01879 1254 Gene3D - 334 586 IPR027417 -
Bva07g01879 1254 Pfam ABC transporter transmembrane region 20 294 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva07g01879 1254 Pfam ABC transporter transmembrane region 688 957 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva07g01879 1254 CDD ABC_6TM_Pgp_ABCB1_D1_like 19 317 - -
Bva07g01879 1254 SUPERFAMILY ABC transporter transmembrane region 673 991 IPR036640 GO:0005524|GO:0016021
Bva07g01879 1254 SUPERFAMILY ABC transporter transmembrane region 9 328 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01879 Bva-Chr7 16888581 16893185 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01879 20 591 Calmodulin-binding Proteins AT2G36910 37.031 2.10e-101 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01879 K05658 - gmx:100788127 2117.04