Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01868 ATGGTTTCCCCGGAAAACACCAATTGGCTTTTCGAATATGCCTTGATTGAAGACATCCCTGTCCCAGATAGGAATTTTAATGTTCCTACTTCTGGTTTTAGCTGGCCAGCGCAGCCCTTGAATGGTTCTTCGAATGGCAGTGTCGAAATGGATGGTGCTTTGGAGGATTCTGATTGCCTTAAAGAGTCTGGTTCAAAGAAGAGGGGTAGATCTGATTCATGTGCTGCTTCTAGCTCCAAGGCATGTCGAGAGAAGTTGCGAAGGGATAGGCTGAATGACAAGTTTCTTGAATTGGGCTCCGTTTTGGAGCCTGGACGGTCTCCCAAAACGGACAAGGCTGCCATTCTGATTGACGCTGTGCGAATGGTAACTCATTTACGGGGTGAAGCCCAGAAGTTGAAAGACTCTAATATGAATCttcaagaaaagataaaagagtTAAAGGCAGAGAAGAATGAACTTCGTGATGAGAAACAGAGGTTCAAATCGGAGAAAGAAAAGTTGGAGCATCAGCTGAAAGCAGTTAATGCACAACCTGGTTTCTTGCCTCCCCCTCCTGCAATTCCTGCTGCTTTCACTGCTCAAGGTCAAGCTCCTGGCAACAAGTTGGTGCCTTTTCTTGGTTATCCAGGAGTTGCCATGTGGCAATTTATGCCCCCAGCTGCTGTGGATACCTCCCAGGATCATGTACTCCGTCCACCAGTTGCCTA 710 0.4606 MVSPENTNWLFEYALIEDIPVPDRNFNVPTSGFSWPAQPLNGSSNGSVEMDGALEDSDCLKESGSKKRGRSDSCAASSSKACREKLRRDRLNDKFLELGSVLEPGRSPKTDKAAILIDAVRMVTHLRGEAQKLKDSNMNLQEKIKELKAEKNELRDEKQRFKSEKEKLEHQLKAVNAQPGFLPPPPAIPAAFTAQGQAPGNKLVPFLGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01868 236 CDD bHLH_AtILR3_like 80 155 - -
Bva07g01868 236 Coils Coil 123 178 - -
Bva07g01868 236 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 126 IPR011598 GO:0046983
Bva07g01868 236 Gene3D - 78 155 IPR036638 GO:0046983
Bva07g01868 236 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 77 145 IPR036638 GO:0046983
Bva07g01868 236 PANTHER BHLH TRANSCRIPTION FACTOR 1 236 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Bva07g01868 236 PANTHER BHLH DOMAIN CLASS TRANSCRIPTION FACTOR 1 236 - -
Bva07g01868 236 SMART finulus 81 132 IPR011598 GO:0046983
Bva07g01868 236 MobiDBLite consensus disorder prediction 56 79 - -
Bva07g01868 236 Pfam Helix-loop-helix DNA-binding domain 79 126 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01868 Bva-Chr7 16823888 16826482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01868 1 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 69.456 8.23e-115 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva07g01868 HLH 5.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01868 - - rcu:8280706 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00758 09 3865536 3868640 Bva07g01868 07 16823888 16826482 BWGD
Bva07g01868 07 16823888 16826482 Bva07g01868 07 16823888 16826482 ECH