Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01861 ATGCCAACAGTGTGGTTCTCTCTGAAGAGATCTCTGCACTGCAAATCAGAGCCATCAGAGGTTCATGACCCAAAATCAAGGAAGCACTTGAGTACAATCTTGACTAAAAGGGCAGGGAGGTCAGGGTGTTCAAGGTCAATAGCAAATCTCAAAGATGTCATCCATGGAAGCAAGAGGCACCTAGAGAAGCCACCAAGTTGCAGCCCAAGATCTATTGGGAGCAGTGAGTTCCTCAACCCAATAACCCATGAAGTGATTTTGAGCAACTCAAGGTGTGAACTGAAAATCACTGGCTTTGGAGGATTTCAAGAAGGGGTTGGCAATGGGGTTGGTGGAGCTTTTAATAATGGCGGTGGTGGTAGTAGCAGTGCTGGTGGTTCAACATTTGTGGGTACTTTAAGGCCAGGGACGCCTGGCCCTGGAGGGCACCCTACAATGCACTATTTTAACCCCTCTTTTAAGACTTCATCAACTCCTCCAAggaaatctcctttccttttatcAGATAAAGAAGGTGGTTCTGCTTTGCATGGTGCTGGATTTCATTCAAGCCATAGGGTTTCTCTTGATACAGATTCTAATGGGTCGTCCACAGTGACTTGTCAAAAATGTGGAGAGCAATTTAACAAATGGGAAGCTGCAGAAGCTCACCATCTCTCCAAGCATGCTGTTACTGAGCTTGTGGAAGGCGATTCGTCAAGGAAAATAGTGGAGATAATATGCAGAACAAGCTGGTTGAAGTCTGAAAACAATTGTGGCAGAATTGAGAGAGTTTTGAAGGTCCACAACATGCAAAAGACGCTTGCTAGATTCGAAGAGTACAGAGAAATGGTGAAGATCAAAGCCAGCAAACTCCCCAAGAAGCATCCTCGGTGCCTCGCCGACGGGAATGAGCTTCTAAGGTTCAATGGCACAACAATTTCCTGCTCTCTCGGTCTCAATGGCTCTTCTAATCTCTGCCTATCTGAAAAATGCTGTGTTTGTAGAATTATCCGAAATGGGttttctaccaaaaaagaGCTCAAGGGTGGCATTGGCGTTTTCACAACTTCCACAAGTGGAAGAGCTTTTGAATCTATTGAGATTTCTGAAGATGATCCATCAACAAGAAAAGCATTGATAGTCTGCAGAGTAATTGCAGGGAGGGTTCATAGGCCTCTGGAGAACATTCAAGAAATGGCAGGCCAAACTGGGTTTGATTCATTAGCTGGGAAAGTAGGCCTTTACTCAAACATAGAGGAGCTTTATTTGCTCAATTCTAGAGCTCTTCTTCCTTGTTTTGTGGTAATTTGCAAACCTTG 1301 0.435 MPTVWFSLKRSLHCKSEPSEVHDPKSRKHLSTILTKRAGRSGCSRSIANLKDVIHGSKRHLEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFGGFQEGVGNGVGGAFNNGGGGSSSAGGSTFVGTLRPGTPGPGGHPTMHYFNPSFKTSSTPPRKSPFLLSDKEGGSALHGAGFHSSHRVSLDTDSNGSSTVTCQKCGEQFNKWEAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENNCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLPKKHPRCLADGNELLRFNGTTISCSLGLNGSSNLCLSEKCCVCRIIRNGFSTKKELKGGIGVFTTSTSGRAFESIEISEDDPSTRKALIVCRVIAGRVHRPLENIQEMAGQTGFDSLAGKVGLYSNIEELYLLNSRALLPCFVVICKP 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01861 433 SUPERFAMILY ADP-ribosylation 224 432 - -
Bva07g01861 433 MobiDBLite consensus disorder prediction 149 163 - -
Bva07g01861 433 PANTHER - 2 433 - -
Bva07g01861 433 Gene3D - 223 432 - -
Bva07g01861 433 MobiDBLite consensus disorder prediction 121 164 - -
Bva07g01861 433 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 433 - -
Bva07g01861 433 ProSitePatterns Zinc finger C2H2 type domain signature. 201 222 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01861 Bva-Chr7 16794385 16796983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01861 1 433 C2H2 Transcription Factor Family AT5G54630 68.172 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva07g01861 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01861 - - gmx:100787790 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01861 07 16794385 16796983 Bva07g01861 07 16794385 16796983 ECH