Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01853 ATGGCGATTAGAGCGGCAGTGGCGGCGCCTCGGGGTTTAAGGAGGCTATTCTCAATCACTACAAATTCAATACCGTCGTTTAATCCTCCACCGGCCACCGCTGCAGCTCCTGCTCGGGAGACGGCCGAGCCCAACACCAACCTCTTCGTCTCTGGGCTCAGCAAGCGTACTACTTCAGAAGGACTAAGGGAAGCATTTTCCAAATTTGGCGAAGTATTTCATGCTAGGGTGGTAACTGATAGAGCAACAGGTTACTCTAAAGGATTCGGTTTTGTAAAATATGCTACTATAGAAGAGGCGGCAAAGGGCATTGAAGGCATGGATGGCAAGTTCCTGGATGGATGGGTTATATTTGCCGAGTACGCAAGACCAAGGCCACCACCTGGACAATCTCAAAATAATACGTCTCCTCCTACATATGGTCGGTATTG 431 0.4942 MAIRAAVAAPRGLRRLFSITTNSIPSFNPPPATAAAPARETAEPNTNLFVSGLSKRTTSEGLREAFSKFGEVFHARVVTDRATGYSKGFGFVKYATIEEAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQSQNNTSPPTYGRY 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01853 143 SUPERFAMILY RNA-binding domain, RBD 32 141 IPR035979 GO:0003676
Bva07g01853 143 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 48 114 IPR000504 GO:0003723
Bva07g01853 143 MobiDBLite consensus disorder prediction 123 143 - -
Bva07g01853 143 Gene3D - 22 135 IPR012677 -
Bva07g01853 143 PANTHER TRANSFORMER-2-RELATED 1 140 - -
Bva07g01853 143 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3, MITOCHONDRIAL-LIKE 1 140 - -
Bva07g01853 143 MobiDBLite consensus disorder prediction 28 52 - -
Bva07g01853 143 SMART rrm1_1 47 120 IPR000504 GO:0003723
Bva07g01853 143 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 46 124 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01853 Bva-Chr7 16753101 16755692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01853 50 126 Eukaryotic Initiation Factors Gene Family AT3G11400 38.961 5.44e-12 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01853 - - zju:107431313 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01853 07 16753101 16755692 Bva07g01853 07 16753101 16755692 ECH