Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01845 ATGGCAGATGATCAATTTCAGACTAGTGGGAACTGGTGGGATTCAGCTAGAAACGTGAGTGGGGCATCGCAATCATCTTCCTCTGCTCTCACTAACATGGGCAACTTTGCTTGGCAACAAGCTTCGGACATGGTGGACATGAAGCCAAGGTCTTCCATGGATTCCATGTCAGCCTCAGGTAGTTCCTCTGTGGTTTTCCATGATACCCAGAAGCTTCAACCACCAGATTCCGCCAGTGCCACAGACCCCAACTTGCATATGATGGGTCTAGGCCTTTCTTCCCAACCCATGGATTGGAATCAAGCATCCTTGCTCCGAGGAGGTGACAAGGGTGGGGAGAGCAGTTTCCGTTCGATGCTGCAAGAGAACTTGAGCTCATCAAGCACCAATTTTCAGCAAGAAACTGGCATGGGATTGTCTCATCAAGTTCAATGGAGGGAAAAGCTGTTTTCTCCAGATTCTTCTTCGAATGAATTTAAGCAAGTAAATAGGGGTTTCTCTTTGGATCAAACCCAGTTTAGTCCTCAATATAGCTCTGGTGATAGCACAGTAACAAGCCAAGGCTTGTCCTCTACTTTTCAGATGGATTCTTCTGCTCTTTATGGAAACCCATCTATATTACAAGGACTGTTAGGACAAGACCATAGTCAACCACAACAAGCTTCATTTGATCAGAATCGAGCCATGAATTTTTCATATCCAGCAAGCTATGGATTGAACTCTACTGAGTTAATGCATTCTTGGTCTAAAGTTCCTCAGTTTTTAAGAGTTTCACCTCCAAAACAGCCACCCCATAATCAACTGCATTTCACAAACAACGCTCCATTCTGGAATGCGTCAGAGCCAGCCATTAAAGATGTGAGATCCGGGTTCTTCCCATCATTGCAAACCCCATTTCCCACACCGAATTTCGACGTACAATCAAAGAATATTTCTGATGTTAGGGACTCGGGCTCCGTGGTGAAGAAAAGTGCTAGCGAACCACCACCCAAAAGGCCTCGAAATGAAACCCCATCGCCTTTGCCAGCTTTTAAGGTGAGGAAGGAGAAGATGGGAGACAGAATCACTGCACTCCAACAATTAGTTTCACCTTTCGGAAAGACTGATACTGCCTCAGTGCTCTCTGAAGCCATTGAATACATCAAATTTCTCCATGAACAAGTGACCGTTTTAAGCACACCATATATGAAAAGTGGAGCTCCAGTGCAAAATCATCAACagAGTTCTGGTAAATCTAAGGAAGCTGAGGGTCCAAAACAAGATCTAAGAAGCCGAGGGCTATGTTTGGTTCCGGTTTCGAGTACATTTCCAGTGACTCATGAAACCACAGTAGATTTTTGGACACCAACGTTCGGAGGAACATTCAGATA 1370 0.4482 MADDQFQTSGNWWDSARNVSGASQSSSSALTNMGNFAWQQASDMVDMKPRSSMDSMSASGSSSVVFHDTQKLQPPDSASATDPNLHMMGLGLSSQPMDWNQASLLRGGDKGGESSFRSMLQENLSSSSTNFQQETGMGLSHQVQWREKLFSPDSSSNEFKQVNRGFSLDQTQFSPQYSSGDSTVTSQGLSSTFQMDSSALYGNPSILQGLLGQDHSQPQQASFDQNRAMNFSYPASYGLNSTELMHSWSKVPQFLRVSPPKQPPHNQLHFTNNAPFWNASEPAIKDVRSGFFPSLQTPFPTPNFDVQSKNISDVRDSGSVVKKSASEPPPKRPRNETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPVQNHQQSSGKSKEAEGPKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTFR 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01845 456 MobiDBLite consensus disorder prediction 399 422 - -
Bva07g01845 456 MobiDBLite consensus disorder prediction 302 343 - -
Bva07g01845 456 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 18 445 - -
Bva07g01845 456 Gene3D - 345 407 IPR036638 GO:0046983
Bva07g01845 456 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 345 398 IPR036638 GO:0046983
Bva07g01845 456 CDD bHLH_AtbHLH_like 341 392 IPR045239 -
Bva07g01845 456 PANTHER TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 18 445 - -
Bva07g01845 456 SMART finulus 346 390 IPR011598 GO:0046983
Bva07g01845 456 MobiDBLite consensus disorder prediction 302 319 - -
Bva07g01845 456 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 335 384 IPR011598 GO:0046983
Bva07g01845 456 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01845 Bva-Chr7 16687470 16690516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01845 106 456 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 47.716 2.41e-79 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01845 - - gmx:100778697 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01845 07 16687470 16690516 Bva07g01845 07 16687470 16690516 ECH