Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01835 ATGGTTACAAGATACAAGGTCTCTCTGTCAGGCCTTATGGAACGCTACACGTGGACAAATCGGACGCAGGGTTGGGAGATTTTCTCTGTTGGCCCTGGGGACCAAGTAAAAACCTCTGAAGGACAAGACCTTTATGTACGACTTGCTGCTTCAGAGCTAGATGATATCAACAGTAACAGTCAGCTAAACAAGAAGCAGCTCGCAGGAATTCTTGTAGGTTGTATTGTGTTCATGACTGGCATTATCATACTTGGATGGATCATATATCTAcagaggaagaaaattaagaagcaagGAAGCAATGATTTAAATCAAGCACAGAATGATactgaaaacaaaaaggaggATGAAATGGACATTGTGTCATCTTGTGCCATGTACTGTTTTGATGAATGTCCTGAGAGAATTTTAGAATGAGTAAAAACCTCTGAAGGACAAGACCTTTACGTACGACTTGCTGCTTCAGAGCTAGATGATATCAACAGTAACAGTCAGCTAAACAAGAAGCAGCTCGCAGGAATTCTCGTAGGTTGTATTGTGTTCATGACTGGCATTATCATACTTGGATGGATCATATATCTACGgaggaagaaaattaagaagcaagATGAGGCAGAGGCTAATACAAAGACAGTAGTTGGAACTCATGGTTATATGCCGCCTGAGTATGCAGTGTATGGATCTTTTTCTACAAAATCTGATGTCTTCAGTTTTGGCGTTATTGTATTGGAGGTGATTAGTGGAAGGAAGAATAGAGAATTCTATGACAGAACTCATCATCTTAACCTTCTTGGATATGCATGGAGATTGTggaatgaggagagaccattGGAGCTGATGGATGAAGCGCTAGGTGAGGTGAGGTTGGAGATGGGCTTAAATGGGTTTCCAGATGCCACTTCCCTTGTCTATGGGCATGGGTACTCTGGCAGAAGGCCAAACAGGGAGCTTAGGAGCGGGAAGAGCAGCTTTCTGGTTCTGGGCAGCGAGCTTGGTCTCTTCTTTCTGCTGTTCAACGGTATCCCTCCGAGTAGCCCTTA 1040 0.4 MVTRYKVSLSGLMERYTWTNRTQGWEIFSVGPGDQVKTSEGQDLYVRLAASELDDINSNSQLNKKQLAGILVGCIVFMTGIIILGWIIYLQRKKIKKQGSNDLNQAQNDTENKKEDEMDIVSSCAMYCFDECPERILEVKTSEGQDLYVRLAASELDDINSNSQLNKKQLAGILVGCIVFMTGIIILGWIIYLRRKKIKKQDEAEANTKTVVGTHGYMPPEYAVYGSFSTKSDVFSFGVIVLEVISGRKNREFYDRTHHLNLLGYAWRLWNEERPLELMDEALGEVRLEMGLNGFPDATSLVYGHGYSGRRPNRELRSGKSSFLVLGSELGLFFLLFNGIPPSSP 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01835 345 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 202 286 - -
Bva07g01835 345 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 38 120 - -
Bva07g01835 345 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 38 120 - -
Bva07g01835 345 SUPERFAMILY Protein kinase-like (PK-like) 204 285 IPR011009 -
Bva07g01835 345 Gene3D Transferase(Phosphotransferase) domain 1 193 299 - -
Bva07g01835 345 Coils Coil 96 116 - -
Bva07g01835 345 Pfam Protein tyrosine and serine/threonine kinase 197 250 IPR001245 GO:0004672|GO:0006468
Bva07g01835 345 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 202 286 - -
Bva07g01835 345 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 136 201 - -
Bva07g01835 345 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 136 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01835 Bva-Chr7 16613893 16624207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01835 202 283 Receptor kinase-like Gene Family AT4G05200 57.317 4.02e-27 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva07g01835 PK_Tyr_Ser-Thr 2e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01835 - - qlo:115977476 139.813