Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01830 ATGGTGTGCGAGCTGTGTGAGAAGCGGGCTGCGATGTACTGCGAGTCGGACCGGGCCAAGCTATGCTGGGGCTGCGACGAGAAGGTCCACGGTGCTAACTTTCTTGTAGCCAAGCACTCTAGGATTCTCCTCTGCCGTGCTTGTCGATCTCCGACTCCATGGAAAGCCTGTGGGCCTAAGCTCACTCCCACAACCTCCATTTGTCAACGGTGCTTTACCAATCCTGCTGGAAAATGTGATCAAGCTAACGGAGACGATGAAAGGGGAGGCGATCGTGATCGCGAAGATGATAGCGATGGAGGTTATAGATCATCTGATGAGAATTCCGGTAATGATTATGACGatgatgattttgatgatgatgacgaCGAGGAGGATGAGGGAGAGAACCAGGTGGTGCCATGGTCCTCTGCTTCGTCGCCGCCACCGGCGTCGGGGAGTTCCACCAATAGTGACGGCGAAGGAGATATGCCGAGCTCTATTGGTGGTGGTGCTTTACCATTAAAACGGTTGCGAGAGAACTACCTCGTTGATTCAGATGATGAGAACGAGATAGGGCGCTCATCATCTGGAATTCCCTCTGCAGCATTATCCAATAATGGAACCGCGTACATGAGAGTACTCAGGCCGTTGAAGCAGCCTCACCGTTGGTA 653 0.5115 MVCELCEKRAAMYCESDRAKLCWGCDEKVHGANFLVAKHSRILLCRACRSPTPWKACGPKLTPTTSICQRCFTNPAGKCDQANGDDERGGDRDREDDSDGGYRSSDENSGNDYDDDDFDDDDDEEDEGENQVVPWSSASSPPPASGSSTNSDGEGDMPSSIGGGALPLKRLRENYLVDSDDENEIGRSSSGIPSAALSNNGTAYMRVLRPLKQPHRW 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01830 217 MobiDBLite consensus disorder prediction 79 167 - -
Bva07g01830 217 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 199 - -
Bva07g01830 217 CDD Bbox1_BBX-like 2 44 - -
Bva07g01830 217 Pfam B-box zinc finger 2 42 IPR000315 GO:0008270
Bva07g01830 217 MobiDBLite consensus disorder prediction 180 201 - -
Bva07g01830 217 SMART bboxneu5 1 44 IPR000315 GO:0008270
Bva07g01830 217 MobiDBLite consensus disorder prediction 186 201 - -
Bva07g01830 217 ProSiteProfiles Zinc finger B-box type profile. 1 44 IPR000315 GO:0008270
Bva07g01830 217 PANTHER OS08G0178800 PROTEIN 3 199 - -
Bva07g01830 217 MobiDBLite consensus disorder prediction 110 130 - -
Bva07g01830 217 MobiDBLite consensus disorder prediction 81 103 - -
Bva07g01830 217 MobiDBLite consensus disorder prediction 132 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01830 Bva-Chr7 16581939 16583373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01830 3 144 C2C2-CO-like Transcription Factor Family AT4G27310 47.826 5.24e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva07g01830 zf-B_box 4.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01830 - - qsu:112040657 176.792
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01830 07 16581939 16583373 Bva07g01830 07 16581939 16583373 ECH