Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01820 ATGGGAAAATCCCCTTCTGGTGAAAAGAATAATGGGTTGAAGAAAGGTCCATGGACTCCAGAGGAAGATGAGAAACTCATGGATTATATTCAGAAGCATGGACCCGGCAAATGGCGAATTCTTCCCAAGAATGCAGGTCTCAGACGATGTGGGAAGAGTTGCCGGCTTCGCTGGACGAACTACTTGAGGCCAGACATAAAGAGAGGGCGATTCTCttttgaagaagaggaagccATCATCCAGTTACACAGCGTTTTGGGAAACAAGTGGTCTACGATTGCTGCCAGCTTGCCAGGAAGAACAGATAACGAGATCAAGAACTATTGGAACACTCATATCAAAAAGAGGCTATTGAAGATGGGAATTGATCCAGTGACTCACACTCCATGCCTTGATCTTCTACAACTCTCCTCAATTTTGAGCTCGTCTTTGTATAATAATTCATCACCCCAGCTTAATTATCCTGGTCTGCTTCAGATGGCAAGCTGGCTAAATCCAAACCTGCTAAATTTGCTCACAACCTTGTTATCATCTCAAAGCAGAAACCcagattttataaatacaaatcaaCTTTTGCAGCAAAACCAACTTGCAGGTATTAGCACTAGTCCCCCAGAGCAAAACCAACACCAGTGTCCTGGACCAATAATGCAGCTTAACTCAGTTCAATCTTTCCAACCAAACCAGCTCCAAGTCCCTATTCAAGGTTCCCAagcaaaattaaatcaagtttCTCCAAGTGACACTCACTTTAGCTACCAGCAAAGTACTCAACCAAATCTGTGGCAATGTAACGGAGGCCAATTGGAACCACAACCAGCTGATCAATCCGCAACAGAAAACTTTTCATTACCAAAATTCAATTCCATGATCAACAGCCTCTTGGGAAATCAAGTTTCGCAGTCTCCCAATAGTGACGGTGtaacaaatttcaatttaagcACACTGTTATCTTCCACGACCTCTTCGTCTAGCCCTAGTGCTTTGAATTCATCATTGACCACGACACTTGTCAATGGCGCCGCTGAAGATGAAAGAGACACTTACTGCAGCAATATGCTCATGTACAATATATCCAATAGTTTACATGACAACGGACTTCTGTG 1106 0.4105 MGKSPSGEKNNGLKKGPWTPEEDEKLMDYIQKHGPGKWRILPKNAGLRRCGKSCRLRWTNYLRPDIKRGRFSFEEEEAIIQLHSVLGNKWSTIAASLPGRTDNEIKNYWNTHIKKRLLKMGIDPVTHTPCLDLLQLSSILSSSLYNNSSPQLNYPGLLQMASWLNPNLLNLLTTLLSSQSRNPDFINTNQLLQQNQLAGISTSPPEQNQHQCPGPIMQLNSVQSFQPNQLQVPIQGSQAKLNQVSPSDTHFSYQQSTQPNLWQCNGGQLEPQPADQSATENFSLPKFNSMINSLLGNQVSQSPNSDGVTNFNLSTLLSSTTSSSSPSALNSSLTTTLVNGAAEDERDTYCSNMLMYNISNSLHDNGLL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01820 368 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Bva07g01820 368 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Bva07g01820 368 SMART sant 14 64 IPR001005 -
Bva07g01820 368 SMART sant 67 115 IPR001005 -
Bva07g01820 368 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 357 - -
Bva07g01820 368 Gene3D - 14 67 - -
Bva07g01820 368 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Bva07g01820 368 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bva07g01820 368 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 66 IPR017930 -
Bva07g01820 368 PANTHER TRANSCRIPTION FACTOR MYB30-LIKE 1 357 - -
Bva07g01820 368 MobiDBLite consensus disorder prediction 1 22 - -
Bva07g01820 368 CDD SANT 70 113 IPR001005 -
Bva07g01820 368 Gene3D - 70 117 - -
Bva07g01820 368 CDD SANT 17 62 IPR001005 -
Bva07g01820 368 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Bva07g01820 368 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01820 Bva-Chr7 16536813 16538172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01820 1 368 MYB Transcription Factor Family AT4G21440 46.982 1.65e-95 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva07g01820 Myb_DNA-binding 2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01820 K09422 - gmx:100820398 392.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01820 07 16536813 16538172 Bva07g01820 07 16536813 16538172 ECH