Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01801 ATGGCCAGTGCTGGTGctggttcttcttctttttcatctttgaaCCGCTGCTTCCATTGCGGCTCCGTGACAACAACCTTCAAAAATGGCTGGAAGCTAAGCAGTGGGGCATTTGCCCTTCTATGCTCTCCCTGCGGCTCGGCATATAAGAATGGCACATTTTGTGAAGCATTTCATTTGGGTGAACAAGGATGGAGCTATTGTGCAGGCTGCAGGAAGATGTTACATTGTGGTTGCATAATGTCAGTTGACAAATTTATCACTCTGGATTTTGGTGGTATCTGCTGTCGGTCTTGTGAGGAGAACTACGGCATTATGGAGGTAATGAAGTTTAGGCAGAGCTCGAGGACTCCAAACCGGGACCTTCCCAAAATTGGATTATCTGTAGACTCTGAAGAAGCAGTGACAGAATGTTACACTATGATCTCTTCTTTTGGGgctagagagaaaattgattGCCCAGTGGAAGACAAAGCAAAAGCTGGTTTTATTGAATCAGCTTCACCTGCAGAGAAAAGCGAGAAGGAGCAGTCAGAAGCCTTAAGAGACTCCAAATCTGGATCTGTTACCCTTTTTAACAAACATTTGACTTCCAGTTCCAGTGATGTTGATCCAAATTACGAACAAATTTGCCGAGTTCCTAACATTAGTTTGATGTTAATAGTTGTTGCCATTGTCATTGTTGTCTGTGATTACTTATATTTTTCTCCCAACTCTTTGAGAAACGGAGGAAAATCGGAAGACAAAATGAGTTTGACCATAAGCTACTGTGGGAGCTATGGTCTCCAATCATGCAGAATTTCAAACTCTAACCCTGACCGTGATAGTCGACATGCAAGATATATTGTTCCCATCAACACGCACAAGAAATCTTCCAAgctggaaaatatttttcagtcaactttgaagattgaTAGTAGCAGCATTAAGACATGCTTAGGTGCCATGACAGTGATAAGCTTGATTGCACCAGCCACTGCAAAAGCTAGTCAGGAAGTGGCTGCTTCTGTTTATGCTTTGGCTGATGGAAGCCTCGGTGACTGGTTTGGAGGATTCCTATATTCAGCTGGACAACAGGCCAATGAAGCTGTTCAGGACCAACTCTCTTCTCTTAGTTTCTCTAGTTTGGCAGTAATTTTTGGAGCAGGGCTTGTAACCAGCCTTTCTCCCTGTACATTGAGTGTCTTACCATTGACCCTTGGCTACATAGGGGCATTTGGCTCTGGCAAGAGCAGAACAGAGGTTATTGGTAATTCTATTGCATTTTCCTTGGGTCTTGCAACCACATTAGCAGTCTTGGGTGTGGGAGCATCATTTGCTGGAAAGGCTTATGGACAAATAGGCCAAGGATTACCTTTGGCTGCTTCTGGTTTGGCAGTAATAATGGGTCTTAATCTTCTTGAGGTCATTGAATTACGACTCCCCTCATTCTTTGAGAATTTTGATCCGCGTGCAGCTGCTTCTAGTTTCCCATCAAGTGCGCAAGCATATCTTGCCGGGCTTGCTTTCGCATTAGCTGCCTCACCTTGCAGTACCCCAGTGCTGGCCACCCTTTTGGGATATGTGGCTGCATCGAAGGATCCAGTGATTGGAGGAAGCTTACTTTTAACATACACAACTGGCTATGTTGCTCCTCTACTCTTAGCTGCTTCTTTCGCTGGCGCATTACAGAGCTTGCTTTCATTCCGCAAATACTCAGCATGGATCAATCCTCTAAGTGGAGCTCTTCTGTTAGGTGGCGGCCTCTATACTTTCCTGGATAGGCTTTTTCCAGCTACGATGGCAATGTA 1790 0.4302 MASAGAGSSSFSSLNRCFHCGSVTTTFKNGWKLSSGAFALLCSPCGSAYKNGTFCEAFHLGEQGWSYCAGCRKMLHCGCIMSVDKFITLDFGGICCRSCEENYGIMEVMKFRQSSRTPNRDLPKIGLSVDSEEAVTDKAKAGFIESASPAEKSEKEQSEALRDSKSGSVTLFNKHLTSSSSDVDPNYEQICRVPNISLMLIVVAIVIVVCDYLYFSPNSLRNGGKSEDKMSLTISYCGSYGLQSCRISNSNPDRDSRHARYIVPINTHKKSSKLENIFQSTLKIDSSSIKTCLGAMTVISLIAPATAKASQEVAASVYALADGSLGDWFGGFLYSAGQQANEAVQDQLSSLSFSSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRTEVIGNSIAFSLGLATTLAVLGVGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEVIELRLPSFFENFDPRAAASSFPSSAQAYLAGLAFALAASPCSTPVLATLLGYVAASKDPVIGGSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKYSAWINPLSGALLLGGGLYTFLDRLFPATMAM 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01801 576 MobiDBLite consensus disorder prediction 146 165 - -
Bva07g01801 576 Pfam Cytochrome C biogenesis protein transmembrane region 359 566 IPR003834 GO:0016020|GO:0017004
Bva07g01801 576 PANTHER CYTOCHROME C-TYPE BIOGENESIS CCDA-LIKE CHLOROPLASTIC PROTEIN 287 576 - -
Bva07g01801 576 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED 287 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01801 Bva-Chr7 16422441 16431009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01801 230 576 Chloroplast and Mitochondria Gene Families AT5G54290 68.889 1.82e-141 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01801 - - gmx:100807029 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01801 07 16422441 16431009 Bva07g01801 07 16422441 16431009 ECH