Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01799 ATGAACGAGAAGGCTAATGTTTCTAAAGAGCTCAACGCCAAGCACAAAAAGATACTGGAAGGACTTCTTAAGTTACCAGAGAATAGGGAATGTGCTGACTGCAAAGCTAAGGGGCCAAGATGGGCTAGTGTGAATCTAGGCATCTTTATATGTATGCAGTGTTCAGGAATACACCGAAGTCTTGGGGTTCATATATCAAAGGTGCGGTCTGCAACATTGGACACTTGGCTTCCAGAGCAGGTTGCATTTATTCAATCGATGGGAAATGAGAAAGCAAACAGTTATTGGGAGGCAGAGTTACCGCCAAATTATGACAGAGTTggaattgaaaatttcatcCGTGCAAAgtATGAAGAGAAGAGATGGGTTCCAAGGGATGGAAAACCAAAATCGCCTTCTAGACTGCAGGAGGAGAAGGCTTCTTTACATTGGCAAAGACCAGCAGAACGAAGTGGGTATGGGTATGCATCTGTTTCTGAGAATAAATTTGAGGAACGAAAGAAAGTTCAACCATCAAATACAGTTCCCGCTACAAGAATTAGTGTTCCTGCTCCTCCCAAAGGACCTGACCAGGTAACTCCTACAAAACCACAGCATGTTGAGAAAGTTGAACCAGTGGCACCACAACCACAATTGGAAACAACAAAACAACCTGCTGAAACAGCTTATGATATCCCTCCAAAAGTTGATTTTGCTACAGACCTTTTCAACATGTTGTCCATGGATGGCCCGATTGAAAATGGCTCAGAGACAGCTAGTGGTGATGATAATAACTGGGCAGGTTTCCAGTCTGCCGCAGAGCCATCAACAGCTGAGAAAACTGTTTCAACAAAACCAGTTGAAAGTACTCCCCAGCCTGCTTCTGGGATTGAGGATTTATTTAAAGATTCACCTTCAGTGACTCCAAGCTTAGTTCCAGAAAAACCGCAAAAAGACGTCAAAAATGATATCATGAGCCTCTTTGAGAAGTCAAGTATGGTGTCTCCATTTGCAATGCATCAACAACAGCTTGCCATGCTGGCACAACAACAGTCCCTTCTGATGGCAGCTGCAGCTAAATCTGCTGGTGGGGACCCCAAGTCCGTCTTGGCACAGCAACAGTCCTTTCTAATGGCTGCACCAGCTAAATCTGCTGGTGGGGACCCCAAATTTCCTGTTAGTACACAACAGCCTGGACTGAATGGATCTATTCCTGTCCAAAGTTGGCCAACTGCGGGCTATCCTATTCCTGGAGTAATGCCCGGGGGTGGTCAGGGAGATTTGCAGAAACTCATGCAGGCTTGGAACACGGTGCCAGCGAATCAAGTGGGGGGCTCTGTTCAGTATCCATCATCTGGTTTGTATACAATGGGACAAGTTGCTCCAGTTAATGGTATGATGACAACTGGAGCGAGTAAACCTCAGTCAGCGGCTCCAGTGTCATCAACTTCTTCACAGACAGGATCAGGGAAGGATTATGATTTTTCCTCTCTAACACAAGGGATGTTTGCGAAACAATG 1499 0.4496 MNEKANVSKELNAKHKKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPNYDRVGIENFIRAKYEEKRWVPRDGKPKSPSRLQEEKASLHWQRPAERSGYGYASVSENKFEERKKVQPSNTVPATRISVPAPPKGPDQVTPTKPQHVEKVEPVAPQPQLETTKQPAETAYDIPPKVDFATDLFNMLSMDGPIENGSETASGDDNNWAGFQSAAEPSTAEKTVSTKPVESTPQPASGIEDLFKDSPSVTPSLVPEKPQKDVKNDIMSLFEKSSMVSPFAMHQQQLAMLAQQQSLLMAAAAKSAGGDPKSVLAQQQSFLMAAPAKSAGGDPKFPVSTQQPGLNGSIPVQSWPTAGYPIPGVMPGGGQGDLQKLMQAWNTVPANQVGGSVQYPSSGLYTMGQVAPVNGMMTTGASKPQSAAPVSSTSSQTGSGKDYDFSSLTQGMFAKQ 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01799 499 MobiDBLite consensus disorder prediction 244 284 - -
Bva07g01799 499 CDD ArfGap 19 117 - -
Bva07g01799 499 MobiDBLite consensus disorder prediction 123 146 - -
Bva07g01799 499 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 361 499 IPR044520 GO:0005096
Bva07g01799 499 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 360 IPR044520 GO:0005096
Bva07g01799 499 MobiDBLite consensus disorder prediction 243 309 - -
Bva07g01799 499 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Bva07g01799 499 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Bva07g01799 499 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Bva07g01799 499 Gene3D Arf GTPase activating protein 1 129 IPR038508 -
Bva07g01799 499 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Bva07g01799 499 SMART arf_gap_3 16 130 IPR001164 GO:0005096
Bva07g01799 499 Pfam Putative GTPase activating protein for Arf 17 123 IPR001164 GO:0005096
Bva07g01799 499 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
Bva07g01799 499 MobiDBLite consensus disorder prediction 459 499 - -
Bva07g01799 499 MobiDBLite consensus disorder prediction 123 145 - -
Bva07g01799 499 PANTHER ARF GTPASE ACTIVATOR 361 499 - -
Bva07g01799 499 PANTHER ARF GTPASE ACTIVATOR 1 360 - -
Bva07g01799 499 MobiDBLite consensus disorder prediction 164 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01799 Bva-Chr7 16411665 16417439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01799 16 123 C2H2 Transcription Factor Family AT4G05330 49.138 3.81e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01799 K12486 - gmx:100807561 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01799 07 16411665 16417439 Bva07g01799 07 16411665 16417439 ECH