Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01785 ATGGAGAGCACCGACTCATCGACCGGTTCACAGCAACCCAATCTCCCACCCGGGTTCCGGTTCCATCCCACCGACGAAGAGCTCGTGGTTCAATACCTCAAGAAGAAAGCCTCCTCTGCTCCTCTCCCTGTTGCGATCATCGCTGAGGTAGATCTTTACAAGTTCGATCCGTGGGAACTCCCAGCTAAGGCATCGTTTGGGGAGCAAGAGTGGTACTTTTTTAGTCCCAGGGATAGGAAGTACCCGAACGGTGCTAGGCCAAACAGGGCGGCGACTTCTGGGTATTGGAAAGCTACTGGGACTGATAAGCCGGTGTTGACCTCTGGTGGAACGCAAAAAGTGGGGGTGAAGAAAGCTTTGGTGTTTTATGGAGGGAAACCCCCGAGAGGGATCAAAAGCAATTGGATCATGCATGAGTATAGGCTTGTTGATAATAAGCCGAACAATAAGCCTCCTGGGTGTGACTTGGGCAACAAGAAAAACTCTCTTCGGCTTGACGATTGGGTTCTATGCCGAATCTACAAGAAGAACAATACGCATAGGTCACCTATGGATCACGACAGGGATGATTCCCTGGATGATATGATTGGAAGGGTACCTCCTTCAATCAACGTGGGCCAAATGAATGCGAGATTTCACCTACCAAAGATGTCCACAAGCTACAGTGGTGCATTGCTCgaaaatgaccaaaatttaTTAGGAGGGGTTCTGAGCAATGGAGGGATCAGCACAAGTAGTGGCATATCGTCTCACTTGGGAACCGCCAACTCCAAGGGAGAGCTTCCTCTATTCCTCCCAGCTATGACGGCCTCATCCAACTCGCTTCCCTCAAAACGAGCACTCTCATCTCTGTATTGGAACGAAGATGTAGCCAGCACTTCATCAAACAAAAGATTGAATCTGGACAATGGAGATGCTAGTCTTGTGAGGACAGAAGAGAATGGCACTGCAACAAGTTCCATAGCCACTTTGCTTAACCAGCTCCCTCAGAACCCTTCGTTGCACCAGCAAACAGTGCTGGGGACATTAGGAGATGGGCTCCTCAGAACACCATATCAAATACCTGGCATGAATTGGTATGCTTA 1085 0.4876 MESTDSSTGSQQPNLPPGFRFHPTDEELVVQYLKKKASSAPLPVAIIAEVDLYKFDPWELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPRGIKSNWIMHEYRLVDNKPNNKPPGCDLGNKKNSLRLDDWVLCRIYKKNNTHRSPMDHDRDDSLDDMIGRVPPSINVGQMNARFHLPKMSTSYSGALLENDQNLLGGVLSNGGISTSSGISSHLGTANSKGELPLFLPAMTASSNSLPSKRALSSLYWNEDVASTSSNKRLNLDNGDASLVRTEENGTATSSIATLLNQLPQNPSLHQQTVLGTLGDGLLRTPYQIPGMNWYA 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01785 361 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Bva07g01785 361 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Bva07g01785 361 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Bva07g01785 361 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Bva07g01785 361 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 337 - -
Bva07g01785 361 MobiDBLite consensus disorder prediction 1 21 - -
Bva07g01785 361 MobiDBLite consensus disorder prediction 1 17 - -
Bva07g01785 361 PANTHER NAC TRANSCRIPTION FACTOR 56 1 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01785 Bva-Chr7 16346668 16348619 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01785 1 361 NAC Transcription Factor Family AT3G15510 55.053 1.99e-128 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva07g01785 NAM 4.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01785 - - vra:106763825 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01785 07 16346668 16348619 Bva07g01785 07 16346668 16348619 ECH