LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva07g01784	ATGGGAGTTCCCCAGACTGACCCGAAGGTAGCCGGGCACCATTTCTCTCTGCAAATCATTGCTGAAATCGACTTGTACAAGTTCGATCCCTGGGTTCTTCCAAGCAAAGCCATATTTGGTGAAAAAGAATGTAGCTCCAGGTTGGACGATTGGGTTCTGTGTCGGATATACAAGAAGAATTCCAGTGCACAGAAGGTTGTTCCAAGTCTTTCAAGCAAGGAATATAGCAatggttcttcttcttcgtcaTCATCCCACCTTGACGACATGCTTGAATCATTACCGGAAATTGATGACCGGTGCTTTGCGCTGCCGCGCGTGAACTCGCTCAAAACGTTTCAACATGATGAGAAGCTCAATTTTCAGAATTCGGGTACCGGGAATTACGTGGATTGGACTACCCCTGTGGTGCTGAACTCGGTGGCGGATATTGCTTCTGGGAATCAATCACAGAGCCAAACTCAGGGGATGATGAGCTACAATACTGGCACTGGCAGTGACCTTTATGTGCCTTCCATGCCGTCGCTAATGGAGGAAGAGGTTCAAAGTGGAGTGAAGAGCCAACGGGTCGACAATTCGGGGTTTTACCAGCAGAATTCGAATGTGTTTACACAAGGATTGTCGAACTCCATTGACCCGTATGGATTCAGATACCCGAGCGAGCAAATCGGGTACGGGTTCAGGCAATA	689	0.4688	MGVPQTDPKVAGHHFSLQIIAEIDLYKFDPWVLPSKAIFGEKECSSRLDDWVLCRIYKKNSSAQKVVPSLSSKEYSNGSSSSSSSHLDDMLESLPEIDDRCFALPRVNSLKTFQHDEKLNFQNSGTGNYVDWTTPVVLNSVADIASGNQSQSQTQGMMSYNTGTGSDLYVPSMPSLMEEEVQSGVKSQRVDNSGFYQQNSNVFTQGLSNSIDPYGFRYPSEQIGYGFRQ	229

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva07g01784	229	PANTHER	NAC TRANSCRIPTION FACTOR 56	45	214	-	-
	Bva07g01784	229	PANTHER	NAC TRANSCRIPTION FACTOR 56	9	43	-	-
	Bva07g01784	229	Gene3D	NAC domain	6	46	IPR036093	GO:0003677\|GO:0006355
	Bva07g01784	229	MobiDBLite	consensus disorder prediction	69	89	-	-
	Bva07g01784	229	SUPERFAMILY	NAC domain	8	59	IPR036093	GO:0003677\|GO:0006355
	Bva07g01784	229	PANTHER	NAC DOMAIN-CONTAINING PROTEIN 72	45	214	-	-
	Bva07g01784	229	PANTHER	NAC DOMAIN-CONTAINING PROTEIN 72	9	43	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva07g01784	Bva-Chr7	16335058	16336500	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva07g01784	9	43	NAC Transcription Factor Family	AT4G27410	55.769	1.51e-10	58.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva07g01784	-		-	qsu:112022199	206.068