Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01764 atggcAGCGGACGCCAGAAGCGGTGAAAGCGCCATCATATCATCGCCAATACAGGGAAACCTCCACGATTCCGCTGTCTGTTTCCGCAACATAATCTTCTTCCTCCACCTCTTAGTCTCTACGTTCTTCGTCGATTTCTGGTTTTCTTCTGTGAAGGCCACATTGCATATGGAACAAAATTTATCGGAACATGCATGCTGGGACTCTAATGGGGGTGCCTCgcataagaaaaatttgaaatccaTTTCAGCACAGACTAGAGTCCGTGATAGTGATACTGATAATGATTGCTTTGATTGCAATATTTGCTTGGACTCTCCGCATGACCCTATGGTCACTCTCTGTGGTCATCTCTACTGCTGGCCATGCATATACAAGTGGCTTCAAGTCCAGAGTTCCTCTGATGAATCAGAACAACAGCAGAAATGCCCAGTTTGTAAAGCCAACATCTCTCTTACTTCATTAGTTCCCCTTTATGGCCGTGAAAATTCAGTTTCTGAAGCCAGGAGAACCCAGATGGGTCTGGGAATACCTAGAAGGCCACTTCCTCACAGCCTGAATTCACTGTTAACTTCTGCGGGTGCATCTACTTCTCATCTAGGTCAACAACTCCATCCAAATTATTTTCAGCCACAACCATATCCATTTCAATATCAGCAATACTTCCCTCACCTTTATGGAGGCTATACTGCAAATGGATCACCTTATCATGGAGGTGCACCTATGACTGCTTTCTTTAGTCCCATGATCGGTATGTTTGGGGAGATGGTCTTTGCAAGGATGTTTGGGATCTCTGATGCAAATTTGTTTTCCTACCGTTACATAAATTCTTACCCTCACAATGGAGGTGGCACTGCTAGAATGAGAAGGCAGGAAATGCAGGTTGACGAGTCCCTGAACAGACTATCTATCTTTCTTCTCTGCTGTGTGATTCTGTGTCTTCTCTTATTCTG 953 0.4355 MAADARSGESAIISSPIQGNLHDSAVCFRNIIFFLHLLVSTFFVDFWFSSVKATLHMEQNLSEHACWDSNGGASHKKNLKSISAQTRVRDSDTDNDCFDCNICLDSPHDPMVTLCGHLYCWPCIYKWLQVQSSSDESEQQQKCPVCKANISLTSLVPLYGRENSVSEARRTQMGLGIPRRPLPHSLNSLLTSAGASTSHLGQQLHPNYFQPQPYPFQYQQYFPHLYGGYTANGSPYHGGAPMTAFFSPMIGMFGEMVFARMFGISDANLFSYRYINSYPHNGGGTARMRRQEMQVDESLNRLSIFLLCCVILCLLLF 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01764 317 Pfam RING-type zinc-finger 100 144 IPR027370 -
Bva07g01764 317 ProSitePatterns Zinc finger RING-type signature. 115 124 IPR017907 -
Bva07g01764 317 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RMA3-LIKE 63 317 - -
Bva07g01764 317 SUPERFAMILY RING/U-box 94 169 - -
Bva07g01764 317 CDD RING-HC_AtRMA_like 98 148 - -
Bva07g01764 317 SMART ring_2 100 146 IPR001841 -
Bva07g01764 317 ProSiteProfiles Zinc finger RING-type profile. 100 147 IPR001841 -
Bva07g01764 317 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 174 IPR013083 -
Bva07g01764 317 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 63 317 IPR045103 GO:0005783|GO:0006511|GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01764 Bva-Chr7 16241661 16243732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01764 73 303 C3H Transcription Factor Family AT4G27470 42.017 3.88e-50 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01764 K10666 - gmx:100817526 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01764 07 16241661 16243732 Bva07g01764 07 16241661 16243732 ECH