Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01759 ATGGCTGAGATGACAGAATTGTTCCCCGTTGGCAAATTATTTGAACGCTTGCCTACTCTATATGACTATACCATCACAATTGATTTAACAAGCTCCATTGTTTTCTGTGTCTtggtcattttcttctttcgcCTCATGTACCACATTCTCCATGGCTTGTTTTTCTGGTACGTCGAAAATGAGGTTGTTCAGGAAGATCTTGAAGGAGGAATTACTTCTGCTTATCCTTCTTCTCACCAACTTGCCATTTTTCAAGCTCTTGTGGGGACCAATCCGCCGCGGGCATGGAGAATTGTTGGAGGATTAGAACGAGTTTTCAAGGTAAAACGAGGACAAAGGCTTAGAGATTCAAACAAGTTGCCTCCTCTGGTTAACTATGGAAGCCATGATGAAGTGGTGAAAAATTTTGGTGACTGTGCCATTTGCTTGGAGGATTTCAAAGTTGGCGAGTTCTGTCAAGTTTTCCCAGAATGCAAAcacatttttcattcaaattgCATAGATTTCTGGTTGCAGAAAAAGCTAACATGCCCAATTTGTCGTAGTTACATAGAAGATTA 560 0.3839 MAEMTELFPVGKLFERLPTLYDYTITIDLTSSIVFCVLVIFFFRLMYHILHGLFFWYVENEVVQEDLEGGITSAYPSSHQLAIFQALVGTNPPRAWRIVGGLERVFKVKRGQRLRDSNKLPPLVNYGSHDEVVKNFGDCAICLEDFKVGEFCQVFPECKHIFHSNCIDFWLQKKLTCPICRSYIED 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01759 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 106 185 IPR013083 -
Bva07g01759 186 PANTHER RING FINGER DOMAIN-CONTAINING 16 183 - -
Bva07g01759 186 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 16 183 - -
Bva07g01759 186 CDD RING-H2_PA-TM-RING 138 181 - -
Bva07g01759 186 Pfam Ring finger domain 138 181 IPR001841 -
Bva07g01759 186 SUPERFAMILY RING/U-box 138 184 - -
Bva07g01759 186 ProSiteProfiles Zinc finger RING-type profile. 139 181 IPR001841 -
Bva07g01759 186 SMART ring_2 139 180 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01759 Bva-Chr7 16224502 16225062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01759 109 181 C3H Transcription Factor Family AT1G53010 46.154 5.95e-16 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01759 - - gmx:102660073 206.838