Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01758 ATGTTTCAGAACCCAGTCATATGCGAAGTTCTACTCTCTTGGATTCTTGTTCACGGTTGGGCTCAGCGTGACATTGAAGCAGGCCAAACCATCCATCTAAGGCGAAGTGATAATGAGGTCTTCGTGGAAGATTACGTTGTCCAGGACAATGAGACATTGATGCAAACAGTTTGGATGCAAGTCTTAGAGAGATTTAGGCCAGAGTACCTTGTAGAAGAAGAGCAAACACAAGCAGTGTTGAATATGCTACCACCGCCAGTGAAGTACAAAAGCCAGGCAGGTtgtgatgatgatgaatgTGTAATTTGCTTGGAGGATTTTGTTGATGGTGAGCCTTGCCGAGTTTTTCCTGTGTGCAAACACAATTTTCATTTGGATTGCATAGATAGATGGTTGAAGAATGGTCAAGCAAATTGCCCAATTTGTCGTCAGTGTGTTGTAGATGCATGCGCTAGGACATG 461 0.423 MQTVWMQVLERFRPEYLVEEEQTQAVLNMLPPPVKYKSQAGCDDDECVICLEDFVDGEPCRVFPVCKHNFHLDCIDRWLKNGQANCPICRQCVVDACART 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01758 100 ProSiteProfiles Zinc finger RING-type profile. 47 90 IPR001841 -
Bva07g01758 100 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 11 95 IPR013083 -
Bva07g01758 100 Pfam Ring finger domain 45 90 IPR001841 -
Bva07g01758 100 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 21 96 - -
Bva07g01758 100 SUPERFAMILY RING/U-box 33 94 - -
Bva07g01758 100 PANTHER RING-H2 FINGER PROTEIN ATL3-LIKE 21 96 - -
Bva07g01758 100 SMART ring_2 47 89 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01758 Bva-Chr7 16222079 16224063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01758 43 94 C3H Transcription Factor Family AT2G17450 51.923 5.21e-16 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01758 - K19040 qsu:112004174 101.293