Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01746 ATGTGCATATGTTGGCGTTCATGCAACTATAAGTGGATGATGATGGAGGGCTCTTCTGGGTCTGCTTCGCAGAGGTCTGATAGTTCTAGAGCATTCAATACCTCTGGAGTTTCAGACAGGAACCCAAGGCTGGTTTGTCCTGAAAGAATCCCTTTTTCTGGTGAGGCATCGTACGATTCCGGCTTTAGAAAGGAAAGAGATAACAGGGTTGTGTTGGGTCAAGGTGATCACCCTAAAAACCTGGGTGGTTTCTCTGGTGCTTGTGAAGATGAAGTAGCAACTGACCCTTTTATTCGTCCTATGGAATGGGGTGATAGAAGCTTAAGGCAATGGTTAGATAAGCCTGACCGATCCGTAGATGTCTTTGAATGTTTGCACGTATTTAGGCAAATAGTAGAAATTGTTAATATAGCGCATTCTCAAGGAATTGTTGTTCATAACGTGAGGCCTTCCTGCTTTGTCATGTCTTCTTTCAATCACGTCTCCTTCATTGAGTCGGGCTCTTGTTCGGATTCTGGCTCAGATTCTTTAGAAGATGGATTGAACAATCGATCTGTTGAGAACAAAATCTCACCATCTCCATGTCCCCGTGATATGCTTCATCAGAGAAGTTTAGgaagtgaaaattttgtacCTGTCCGGACGTCAACAACTGCTTTGTCAGAATCTAGTTGCATGTTGTCAAGTGCAGTCTATGCAGCACGTGCATCGTTAATAGAAGATACCGAAGAACATAAAgccaaagaaaggagaaaggtTGAAGAAGTAGAAGGGAAAAAGCAATCATTTCCAATGAAACAAATACTGCTAATGGAGACAAGTTGGTACACTAGTCCTGAAGAGGCAGCCGGCGCTCAAATTTCCTGTGCTTCAGACATCTACAGATTGGGGGTTCTCCTTTTTGAGTTATTCTGTCCGCTCAGctcaagagaagaaaagagtagAACCATGTCTAGCCTTAGACATCGAGTTCTTCCTCCACAGTTACTTCTGAAGTGGCCTAAAGAAGCTTCGTTTTGTTTGTGGTTACTTCATCCTGAGCCTAGTAGTCGTCCCACACTTGGGGAGTTATTACAAAGTGAGTTCCTTAATGAACAGAGAGATGATATGGAAGAACGTGAAGCAGCTTTAGAGCTTAGAGAAAAGATAGAGGAACATGAATTGTTGCTAGAATTCCTACTATTACTTCagcagagaaaagaagaagttgCTGATAAATTGCAACAAACTGTTTCTTTTCTGTCTTCAGATATTGAAGAAGTGACCAAGCAGCAAATgagatttaaagaaaaaactggTTCTGAACTAGGGAGTGATGATCGGTCAGCATCAAATTTCCCATCCACAACAGTTATTGATAGTGAAGATTCTGCTTGCCTAGGAACCAGAAAACGGGTCAGACCAGGGATGCATGTTTACAATATTGAGGGATGTGATGATAATATAGGAGATGATGAGAAAAACCCTGAAAGTGTTCTTTCAAAAAGTTATCGGCTGATGAAGAACTTTAAGAAACTTGAGTCTGCATACTTTTTAACGAGATGCAAACCAAGCTACTCTTTGGGGAGACCTGTGGTTAGACATTCACCAATATCTACCGATGGTAGAGGCTCTGTTGTTGTGACTGAAAGAAGTTATGTCAGTAACTTGGCATCAAAAGAGAAGAGCAGGGATGATAGAAGTGGTTGGATAAATCCTTTCCTGGAGGGTTTGTGCAAGTATCTTTCTTTTAGTAAGCTAAAGGTTAATGCTGACCTAAAGCAAGGAGATCTTTTGCATTCTTCCAACCTAGTATGCTCACTCAGTTTTGATCGTGATGGAGAATTTTTTGCTACTGCGGgtgtaaataagaaaattaaaatctttgaaTGTGACTCAATCATAAATGAGGATCGAGATATCCATTATCCGGTAGTTGAGATGCCTAGCAGGTCAAAGTTGAGCAGTATATGTTGGAACACTTACATCAAAAGTCAAATTGCTTCAAGTAACTTTGAAGGTGTAGTACAGTTATGGGATGTAACAAGAAGTCAATTGCTGTCGGAAATGAGGGAGCACGAACGGCGGGTGTGGTCCATTGATTTCTCAGCAGCAGACCCAACAATGTTGGCAAGCGGGAGCGATGACGGTTCTGTTAAGCTATGGAGTATCAATCAGGGAGTTAGTGTTGGAACCATCAAAACAAAGGCAAATGTATGCTGTGTCCAGTTTCCCCTGGATACTGGTCGTTTCCTTGCATTTGGTTCAGCGGATCATCGAATATATTACTATGATCTCCGTAACTTAAAGATGCCTCTTTGTACTTTAGTTGGACATAATAAGACCGTGAGCTACGTCAAGTTTGTGGATCCTGTGAGCCTTGTCTCTTCATCCACGGATAACACTTTGAAACTATGGGATTTGTCTATGTGCACATCTCGAGTTATAGATACTCCAGTTCAATCATTCACAGGACACATGAATGTCAagAACTTTGTGGGGTTGTCAGTATCTGATGGTTACATTGCTACTGGTTCTGAGACTAATGAGGTGTTCATATACCATAAAGCTTTTCCCATGCCAGCATTGTCcttcaagtttcaaaataCAGATCCACTTTCTGGGCATGAAATGGATGATCCTGCACAGTTCATCTCTTCTCTTTGCTGGCGTGGTCAGTCTTCAACCTTAGTTGCTGCAAATTCCACAGGGAACATCAAAATTCTGGAGATGGTGTA 2717 0.3986 MCICWRSCNYKWMMMEGSSGSASQRSDSSRAFNTSGVSDRNPRLVCPERIPFSGEASYDSGFRKERDNRVVLGQGDHPKNLGGFSGACEDEVATDPFIRPMEWGDRSLRQWLDKPDRSVDVFECLHVFRQIVEIVNIAHSQGIVVHNVRPSCFVMSSFNHVSFIESGSCSDSGSDSLEDGLNNRSVENKISPSPCPRDMLHQRSLGSENFVPVRTSTTALSESSCMLSSAVYAARASLIEDTEEHKAKERRKVEEVEGKKQSFPMKQILLMETSWYTSPEEAAGAQISCASDIYRLGVLLFELFCPLSSREEKSRTMSSLRHRVLPPQLLLKWPKEASFCLWLLHPEPSSRPTLGELLQSEFLNEQRDDMEEREAALELREKIEEHELLLEFLLLLQQRKEEVADKLQQTVSFLSSDIEEVTKQQMRFKEKTGSELGSDDRSASNFPSTTVIDSEDSACLGTRKRVRPGMHVYNIEGCDDNIGDDEKNPESVLSKSYRLMKNFKKLESAYFLTRCKPSYSLGRPVVRHSPISTDGRGSVVVTERSYVSNLASKEKSRDDRSGWINPFLEGLCKYLSFSKLKVNADLKQGDLLHSSNLVCSLSFDRDGEFFATAGVNKKIKIFECDSIINEDRDIHYPVVEMPSRSKLSSICWNTYIKSQIASSNFEGVVQLWDVTRSQLLSEMREHERRVWSIDFSAADPTMLASGSDDGSVKLWSINQGVSVGTIKTKANVCCVQFPLDTGRFLAFGSADHRIYYYDLRNLKMPLCTLVGHNKTVSYVKFVDPVSLVSSSTDNTLKLWDLSMCTSRVIDTPVQSFTGHMNVKNFVGLSVSDGYIATGSETNEVFIYHKAFPMPALSFKFQNTDPLSGHEMDDPAQFISSLCWRGQSSTLVAANSTGNIKILEMV 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01746 905 ProSiteProfiles Trp-Asp (WD) repeats profile. 769 802 IPR001680 GO:0005515
Bva07g01746 905 PANTHER PROTEIN SPA1-RELATED 2 15 905 IPR044630 GO:0009640
Bva07g01746 905 Gene3D Transferase(Phosphotransferase) domain 1 104 375 - -
Bva07g01746 905 Gene3D - 569 905 IPR015943 GO:0005515
Bva07g01746 905 SUPERFAMILY Protein kinase-like (PK-like) 73 372 IPR011009 -
Bva07g01746 905 CDD WD40 598 901 - -
Bva07g01746 905 MobiDBLite consensus disorder prediction 19 39 - -
Bva07g01746 905 Coils Coil 239 259 - -
Bva07g01746 905 SMART serkin_6 12 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g01746 905 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 769 802 - -
Bva07g01746 905 ProSitePatterns Trp-Asp (WD) repeats signature. 787 801 IPR019775 -
Bva07g01746 905 Pfam WD domain, G-beta repeat 678 716 IPR001680 GO:0005515
Bva07g01746 905 Pfam WD domain, G-beta repeat 593 622 IPR001680 GO:0005515
Bva07g01746 905 Pfam WD domain, G-beta repeat 765 800 IPR001680 GO:0005515
Bva07g01746 905 SUPERFAMILY WD40 repeat-like 593 902 IPR036322 GO:0005515
Bva07g01746 905 SMART WD40_4 719 758 IPR001680 GO:0005515
Bva07g01746 905 SMART WD40_4 762 800 IPR001680 GO:0005515
Bva07g01746 905 SMART WD40_4 676 716 IPR001680 GO:0005515
Bva07g01746 905 SMART WD40_4 859 903 IPR001680 GO:0005515
Bva07g01746 905 SMART WD40_4 588 623 IPR001680 GO:0005515
Bva07g01746 905 SMART WD40_4 809 848 IPR001680 GO:0005515
Bva07g01746 905 SMART WD40_4 634 673 IPR001680 GO:0005515
Bva07g01746 905 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 683 720 - -
Bva07g01746 905 Coils Coil 404 424 - -
Bva07g01746 905 ProSiteProfiles Protein kinase domain profile. 8 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g01746 905 PRINTS G protein beta WD-40 repeat signature 787 801 IPR020472 -
Bva07g01746 905 PRINTS G protein beta WD-40 repeat signature 703 717 IPR020472 -
Bva07g01746 905 PRINTS G protein beta WD-40 repeat signature 660 674 IPR020472 -
Bva07g01746 905 PANTHER PROTEIN SPA1-RELATED 3 15 905 - -
Bva07g01746 905 Coils Coil 360 380 - -
Bva07g01746 905 ProSiteProfiles Trp-Asp (WD) repeats profile. 683 725 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01746 Bva-Chr7 16169965 16175650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01746 673 847 Miscellaneous Gene Families AT5G08390 25.000 9.44e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01746 - - gmx:100811457 1428.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00864 09 4448550 4453719 Bva07g01746 07 16169965 16175650 ECH
Bva07g01746 07 16169965 16175650 Bva07g01746 07 16169965 16175650 ECH