Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01735 ATGGAGGCCAAGAGTATTGAGAGGAACAGAAATTCAATTGAGAAGTTTAAAAAGGCTAGCATGGTTGAAGAAGAGATGGATGATGAAGCGgaggaagatgatgaaggTGGTGGAGGGAATGGGGGGCCTCTTgcagaggagaagaagaaagcatctGTGGGGAGTGGGAGAAGAGGATCAAGTGGAGGTGGCGGAGCTTCTCCACCTTCTTGTCAAGCAGAGAGGTGTGGAGCTGATCTCACTGATGCAAAACGCTACCATCGCCGCCATAAGGTGTGTGAGTTCCATTCCAAGGCGCCAGCTGTGATGGTTGCCGGGCTGAGGCAAAGGTTCTGCCAGCAATGCAGCAGGTTCCATGACGTGGGGGAATTTGATGAAACTAAAAGAAGCTGCCGCAGGCGTTTGGCCGGACACAACGAAAGGCGACGGAAAAGTTCAGCTGAGTCTTGCAATGAGGGCTGCAGCCGCAGTAAAGGCCACCAGCCAAAGGAAAACCAGTGCAGGCCAGCTGATGACGGAGGAAGAATTCCGATGAACATCCCTGGGAGTTCTGGCTACAAATCTTTCCACATCAGATA 578 0.4844 MEAKSIERNRNSIEKFKKASMVEEEMDDEAEEDDEGGGGNGGPLAEEKKKASVGSGRRGSSGGGGASPPSCQAERCGADLTDAKRYHRRHKVCEFHSKAPAVMVAGLRQRFCQQCSRFHDVGEFDETKRSCRRRLAGHNERRRKSSAESCNEGCSRSKGHQPKENQCRPADDGGRIPMNIPGSSGYKSFHIR 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01735 192 MobiDBLite consensus disorder prediction 1 24 - -
Bva07g01735 192 SUPERFAMILY SBT domain 69 149 IPR036893 GO:0003677|GO:0005634
Bva07g01735 192 ProSiteProfiles Zinc finger SBP-type profile. 68 145 IPR004333 GO:0003677
Bva07g01735 192 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1 192 - -
Bva07g01735 192 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 1 192 IPR044817 GO:0003677
Bva07g01735 192 MobiDBLite consensus disorder prediction 1 74 - -
Bva07g01735 192 Pfam SBP domain 71 144 IPR004333 GO:0003677
Bva07g01735 192 Gene3D - 61 132 IPR036893 GO:0003677|GO:0005634
Bva07g01735 192 MobiDBLite consensus disorder prediction 136 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01735 Bva-Chr7 16110173 16111719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01735 56 149 SBP-box Gene Family AT1G53160 71.277 2.16e-41 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bva07g01735 SBP 3.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01735 - - aprc:113864686 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00640 09 3334225 3336269 Bva07g01735 07 16110173 16111719 ECH
Bva07g01996 07 17419030 17420557 Bva07g01735 07 16110173 16111719 ECH
Bva07g01735 07 16110173 16111719 Bva14g01400 14 6984736 6986473 ECH
Bva07g01735 07 16110173 16111719 Bva13g01153 13 5750559 5752168 ECH
Bva07g01735 07 16110173 16111719 Bva07g01735 07 16110173 16111719 ECH