Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01724 ATGGATAGCTACTACGACTTTGATGACAACGATGCCCTTCTGCCTCCTGGGTTTCGTTTTCATCCAACTGATGAGGAGCTCATCACCTACTACCTCCTGAAGAAGGTGCTTGACAACAAATTCACAGGCAGAGCTATTGCTGAAGTTGACCTCAACAAGTGCGAGCCTTGGGAGCTTCCTGAGAAAGCGAAAATGGGGGAGAAGGAGTGGTACTTCTTCAGCCTACGTGACAGAAAATACCCAACTGGGTTACGTACGAATAGGGCTACCGAGGCCGGTTACTGGAAAGCGACTGGCAAAGACAGGGAGATTTACAGCTCCAAGACATGCTCTTTGGTGGGGATGAAGAAGACCCTGGTTTTCTACAGAGGCAGAGCACCTAAAGGCGAGAAGAGCAACTGGGTCATGCATGAGTATCGCCTAGAAGGCAAATTTGCCTACCATTACCTCTCACGTAGCACCAAGGACGAGTGGGTCATTTCCCGTGTGTTCCAAAAGAGCTACGCTGgaggcggcggcggcggcgccATAGTGTGTACAAGCAGTGGATCTAAGAAAGCCCGAATGAGCCCCTCAGTTAATATGAGCCTCTACCCAGAACCCAGTTCGGCCTCTTCGGTTTATCTCCCGCCACTGCTTGATTCCTCCACCTACCCTAACACCACCACTGCCTGTAACACTGCCGTCTCCGCCGCCATGAATGAGCATGAAATCTGCTCATATGAAAATACCACATCAAAGGAGCACGTGTCCTGTTTCTCCACAATCTCTGCAGCCGCGGCCGCTGGGAACAACAACTTCACAAACGTTAGCTTCGATCTTGCTCCTACGCAGCCTTGTCTGTCTATGGACCCTTTTTCTCTATTCCAAAGGAATGTTGGAGTCTCTGCCTTCCCAAGCCTGAGGTCTCTGCAGGACAGTCTTCAGTTCCCCTCCATCTCCCCGGCGGCGCAGCCTATCCAAGGCGACATGAATGGGTGCGGCACCGTCGGGAACTGGAAGATGCCGGAGGAGCCGAGGGTGGCTGACGGTTGTGGTGCCAGCATGGCAATGGGCCTCTCGGAGCTTGACTGCATGTGGGGATACTG 1088 0.5138 MDSYYDFDDNDALLPPGFRFHPTDEELITYYLLKKVLDNKFTGRAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSRSTKDEWVISRVFQKSYAGGGGGGAIVCTSSGSKKARMSPSVNMSLYPEPSSASSVYLPPLLDSSTYPNTTTACNTAVSAAMNEHEICSYENTTSKEHVSCFSTISAAAAAGNNNFTNVSFDLAPTQPCLSMDPFSLFQRNVGVSAFPSLRSLQDSLQFPSISPAAQPIQGDMNGCGTVGNWKMPEEPRVADGCGASMAMGLSELDCMWGY 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01724 362 SUPERFAMILY NAC domain 12 166 IPR036093 GO:0003677|GO:0006355
Bva07g01724 362 Pfam No apical meristem (NAM) protein 15 141 IPR003441 GO:0003677|GO:0006355
Bva07g01724 362 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-LIKE 5 359 - -
Bva07g01724 362 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 359 - -
Bva07g01724 362 ProSiteProfiles NAC domain profile. 14 166 IPR003441 GO:0003677|GO:0006355
Bva07g01724 362 Gene3D NAC domain 23 169 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01724 Bva-Chr7 16044058 16045819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01724 4 362 NAC Transcription Factor Family AT5G53950 53.158 1.25e-112 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva07g01724 NAM 2.9e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01724 - - gmx:100805987 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01724 07 16044058 16045819 Bva07g01724 07 16044058 16045819 ECH