Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01703 ATGGATCAGATGACTGATTTGGAAATGGATCAACAAAGACACGGTTATTTTCATTCTGAACCTTGTATCCTTCTGAGGGGTGGCAACTTCTCACAGCCTAACATCCACAATGTGGTGACAGCTTCAGGGAACACAACTAATATTGATTCCCACTATTTACCAGATGCTTATGACAATGCCATGATGTATGGGGTGACACAATACAATAGCATACAACATCAACACAATCTTGATATGGGTGTTGCAGCTGCACCCAACTTATATTATTCTGGCATGAATCCTTCTTCCAGTACTGGTGTATTACCTGTGCCTCTAAGTCACAGAACATCTGATCAGTTGCCTGCTTCTAGCACATTTACAGTTCCTGGAGTTTCATCAGATAATTTTGGAAGGAGCAGTGGCTTCATTGATGATGTCAGAGGtccatacaaaagaaaaattgctgAAGGCATCAGAGGAAATTTCCAGTATTTTAATCCTTCAGCTAGTTCTTCAGTTCCTCCTCCAACTGTAAGGCACCCTGATGGGGTTGCTATTATGGATGCTGCATCCTTTTCACTGCCTCAATTCCCTATGGGACCTCATGGTAATGCGTGGAGCAGGTCAAGTGAGGCTGTTATGGTGCATGAACATAACCATATGATTCGAGGAAACTATTTGGGGCAGCACTTTCAGCCAGTAGCTCCTCCCTGGTTGGACCAACAGTTGAACAGTAATAATGGAGATGGACATCCTGCAGCCTGGAATCCTTCTCTTCCAATGCCTTATATGCAAACTCCCAATCTTAATGGAAGTTCTTTAGATAATGCCAACATGGGTTTGCAGAGATATCAGGATACAGCTAGCAACAGAAGTGGCCTCAGGTTTCCTCATCCTGCTCCTGCTAATCATCAGCATCATAATTATCATCATCCAACACTGCCTATGCCCGGAATGAGAGGCCACAATATCAGCTTTCACCCACCAGTTACTGCAACTTCATATAGAGTTCCGACAAATCCTTCACGCGGTACTGTGATACCAGCACAGAATGGTTTTGAGATGAGCACTAGGCATGCTGGCCCATCACCTTCAGCAGGCCTACCAGTATTCCGTCCTCACAGAGGAGCGTTGCCTGAGACAACTCTTGGACATCGAAATCTTCCTCACATGAGCATTCTCCAAGTTGACGATGTTGCTATACTTGATATGCAAGAATTCTATGAAGTGGGATATGTTGATCATCACAGAGATATGCGTTTGGACATTGAGGATATGTCTTATGAGGAACTTCTTGCATTGGGTGAGCGGATTGGCAATGTTAGCACTGGTTTATCGGAGGAAATCATTACAAGGCACTtgaagacaaatttttttgtaacatCTGCAAAGGATATCAATCTGGAGGAGGCAGCTTCTGAGGATCAGGAAACTGACTCTTGCATAATATGTCAGGATGAATATAAGGACGAAGAGAAGATTGGAATTCTTCAATGTGGGCACGAGTATCATGAAAGTTGCTTAAAGAAATGGTTGCTTGTGAAAAATGTATGCCCTATATGCAAATCAGAAGCATTGACTCCCGGAAGAAAGGGAGTATA 1580 0.4241 MDQMTDLEMDQQRHGYFHSEPCILLRGGNFSQPNIHNVVTASGNTTNIDSHYLPDAYDNAMMYGVTQYNSIQHQHNLDMGVAAAPNLYYSGMNPSSSTGVLPVPLSHRTSDQLPASSTFTVPGVSSDNFGRSSGFIDDVRGPYKRKIAEGIRGNFQYFNPSASSSVPPPTVRHPDGVAIMDAASFSLPQFPMGPHGNAWSRSSEAVMVHEHNHMIRGNYLGQHFQPVAPPWLDQQLNSNNGDGHPAAWNPSLPMPYMQTPNLNGSSLDNANMGLQRYQDTASNRSGLRFPHPAPANHQHHNYHHPTLPMPGMRGHNISFHPPVTATSYRVPTNPSRGTVIPAQNGFEMSTRHAGPSPSAGLPVFRPHRGALPETTLGHRNLPHMSILQVDDVAILDMQEFYEVGYVDHHRDMRLDIEDMSYEELLALGERIGNVSTGLSEEIITRHLKTNFFVTSAKDINLEEAASEDQETDSCIICQDEYKDEEKIGILQCGHEYHESCLKKWLLVKNVCPICKSEALTPGRKGV 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01703 526 ProSiteProfiles Zinc finger RING-type profile. 474 515 IPR001841 -
Bva07g01703 526 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 128 523 IPR045191 GO:0061630
Bva07g01703 526 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 128 523 - -
Bva07g01703 526 SUPERFAMILY RING/U-box 466 519 - -
Bva07g01703 526 SMART ring_2 474 514 IPR001841 -
Bva07g01703 526 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 439 519 IPR013083 -
Bva07g01703 526 Pfam Ring finger domain 472 515 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01703 Bva-Chr7 15951842 15955469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01703 387 519 C3H Transcription Factor Family AT2G15530 47.015 2.82e-37 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01703 K19041 - gmx:100800642 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01703 07 15951842 15955469 Bva07g01703 07 15951842 15955469 ECH