Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01700 ATGAAGGAATTGGGACAAATAATTTGGCCAGGGAGACCTTGGCATACTCCAAGAGGATGGACCATACCAACTAGAGATAAACCACTAAGAATTGGGGTCCCCTCTCTGTCTCTATGGAAACAGCTTGTCCAGGTAATTCAAGATCAATCAGAAAATACTACCTCCTTCCAAGGTTTTGCCATAGATCTTTTTAGAGAAACTGTAGATTTGTTACCATACCATCTACCATACCAATTCTATCCATTCGATGATCCATCATATGATGATTTGGTGAAGCAAGTTTACTTGAAGAATTTTGAAGCAGTTGTTGGCGATGTCACAATAGTTGCAGATCGGTATCAGTATGTTGAATTTTCTCAGCCCTACACCGATCCAGGATTTGTGATGGTAGTCCCTCTTCAATCAAAAGCAAGCAATAGAACTTGGTTATTCCTGAAGCCTTTTACCAAGATCATGTGGGTTTTAATTGGGGCCATGGCTGTGTACAATGGTTTTGTTCTATGGCTTATAGAAAAAAACAACTGCCCTGAACTTAAGGGCTCTGTGCTAAATCAATCCGGGACCATGATGTGGTTGGCTTTCACCACTCTCATCTCCTTGCAtgGAGATAAGCTGCACAGCAATTTATCAAGGATGACTATGGTAATGTGGCTGTTTGTGGCTCTAATCATAACACAGAGTTATACGGCTAACCTCGCAAGCATGTTGACAGTGGAGCGGCTTGAACCCAAAATAAATGATGTTGAGCAGCTAAGGAATAGCAATGCAATGgCATTCCCAAAGGGTTCTCCATTGCTTCCTAGCGTAAACAGAGCCTTACTAGAGGTATTTGAAAGTGGAAAGCTGCgggaaatagaaaacaaaatgctTGCCGCAGAGAAATGTGAAGAGGCAGCAACAGATGGAGAAAGTACAAGTCTTAGCCCCCAGAGCTTCTGGGCACTCTTCATATTAACAGGAGGGACATCAACATTTGCTCTcttgatttatattattcGTATGAGTGATtcggaccaaggaaagagaacAATGTGGAGATTGATGATGGTGATGATTCAACAATGGGGAGCTCACAAGAGAAGATTCTCAAGAAGAGTCAGTGATGTTGTAGAGCATGATCATTTAAACTCTCCAAACACATCAGCGTTTCCTACTCAAGTTTA 1163 0.3981 MKELGQIIWPGRPWHTPRGWTIPTRDKPLRIGVPSLSLWKQLVQVIQDQSENTTSFQGFAIDLFRETVDLLPYHLPYQFYPFDDPSYDDLVKQVYLKNFEAVVGDVTIVADRYQYVEFSQPYTDPGFVMVVPLQSKASNRTWLFLKPFTKIMWVLIGAMAVYNGFVLWLIEKNNCPELKGSVLNQSGTMMWLAFTTLISLHGDKLHSNLSRMTMVMWLFVALIITQSYTANLASMLTVERLEPKINDVEQLRNSNAMAFPKGSPLLPSVNRALLEVFESGKLREIENKMLAAEKCEEAATDGESTSLSPQSFWALFILTGGTSTFALLIYIIRMSDSDQGKRTMWRLMMVMIQQWGAHKRRFSRRVSDVVEHDHLNSPNTSAFPTQV 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01700 387 PANTHER GLUTAMATE RECEPTOR 1 257 - -
Bva07g01700 387 PANTHER GLUTAMATE RECEPTOR 258 380 - -
Bva07g01700 387 Pfam Ligand-gated ion channel 152 321 IPR001320 GO:0015276|GO:0016020
Bva07g01700 387 Gene3D - 141 261 - -
Bva07g01700 387 Gene3D - 36 140 - -
Bva07g01700 387 SMART GluR_14 30 292 IPR001320 GO:0015276|GO:0016020
Bva07g01700 387 SUPERFAMILY Periplasmic binding protein-like II 6 288 - -
Bva07g01700 387 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 257 - -
Bva07g01700 387 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 258 380 - -
Bva07g01700 387 Pfam Bacterial extracellular solute-binding proteins, family 3 53 135 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01700 Bva-Chr7 15943549 15946375 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01700 256 332 Ion Channels AT5G11180 37.179 1.51e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01700 - - gmx:100799573 394.815