Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01699 ATGATTACCAAGTTAATTATAGCAAATCATGCAGCAGCTGATGAGAGTTCTAACATATCTCAGGTCCATGTTAAGGGCATAATAGGAGCTATTACAGATAACAGTTCTCGCATTGGAAAAGAGCAGATAGTGGCTATGAAGATGGCATTGCAGGATTTCTATCATCGCAGAAATCAAACCTTTGTTCTTCACCTAATGAACTCTAATGGGGATCCTCTTCAGGCAGCTCATGCAGCTAAAGATCTTATAGATAAAGACAAAGTGCAAGCCATCATAGGACCACAAACATGGGAAGAGACAGCTTTGGTGGCTGAGATTTGCAGCCAAAAGAACACAccacttatttatttagctGATGCAACTCCAAAGTGGGGAACAGATAAGTGGCACTTCCTTGTTCAAGGCTCACCTGCCCAGTTTATGCAGATGAAGGCTATAGCTGCTATTGTTCAGTCCTGGGAATGGCGTCAGGTTACAGTAATCTATGAAGACAGAGATTCTTCATCCACTGGAGTTTTAGCTCATCTCACAAAAGCACTCAGCCAAACTGGCATAGAGATAAGCGATCTTTTGGCCATCCCTCCTTTTGTTTCCTCTTCATTGTCCCATAAACTTAACAGTCTCAGAGAAGGACAATGTAGAGTCTTTATTGTCCATTTGTCCTTTCCTTTGGCTCTTCACTTTTTTGAAATGGCAAAAAGAATGAACATGATGGAGAAAGGTTACGTATGGCTCACCACTGATACCTTTTCTAGCTTTGTCCATTCCTTGAATGCTTCCACTATCTCCTCCATGGAAGGGATTATAGGAGTCAAGAGCTACTTCCCAAAAATAGGGACTCAGTATGAGGATTTCTACCATAGATTTCgccaaaattttaacttagagAATCCTCAAGAGTTTAACCATGAGCCTGGGATCTTCGCAGCCCGGGCCTATGATGTTGCTTGGACTACGGCTCTGGCAATGACAGAAGCCAATAAGGGTGGCCAAGTTTTTCTAGACAAGATTTTCCAAAGTAATTTCACTGGTTTAAGTGGAAAATTTTACttcattgataataaattagcTCCTGAAAAGTCTTTTCAGATCATCAATCTGATGGGAAAGAGTCACGGGGAACTTGGATTTTGGACAAATGGACTGGATTTCTCACGAAgtattggaccaaatgcttCTTATAACCGTTCAATGAAGGAATTGGGACAAATAATTTGGCCAGGGAGACCTTGGCTTACTCCAAGAGGATGGACCATACCAACTAGAGATAAACCACTAAGAATTGGGGTCCCCTCTTTGTCTCTATGGAAACAGCTTGTCCAGGTAATTCAAGATCAATCAGAAAATACTACCTCCTTCCAAGGTTTTGCCATAGATCTTTTTAGAGAAACTGTAGATTTGTTACCATACCATCTACCATACCAATTCTATCCATTCGATGATCCATCATATGATGATTTGGTGAAGCAAGTTTACTTGAAGAATTTTGAAGCAGTTGTTGGCGATGTCACAATAGTTGCAGATCGGTATCAGTATGTTGAATTTTCTCAGCCCTACACCGATTCAGGATTTGTGATGGTAGTCCCTCTTCAATCAAAAGCAGGCAATAGAACTTGGTTATTCCTGAAGCCTTTTACCAAGATCATGTGGGTTTTAATTGGGGCCATGTCTGTGTACAATGGTTTTGTTCTATGGCTTATAGAAAAAAACCACTGCCCTGAACTTAAGGGCTCTCTGCTAAATCAATCCGGGACCATGATGTGGTTGGCTTTCACCACTCTCATCTCCTTGCAtgGAGATAAGCTGCACAGCAATTTATCAAGGATGACTATGGTAATGTGGCTGTTTGTGGCTCTAATCATAACACAGAGTTATACGGCTAACCTCGCAAGCATGTTGACAGTGGAGCGGCTTGAACCCACAATAAATGATGTTGAGCAGCTAAGGAATAGCAATGCAATGGTTGGATATACCAGAGGATCCTTCGTGAAGACATATCTGCACAAAGTATTACACTTCAACCCTGAAAACCTAAAGTGTCTCAATTCATTGGAAGAGTATGCCGAAGCCctcagaaagaaagaaatagcaGCTTTCTTCATTAAAGTTGCTGGGTCCAAAATTTTCCTTGCAAAATACTGCAAAGAGTTTACTCAAGCTGGACCCACGTACAAAGTTGGAGGGCAAGGATTTGCATTCCCAAAGGGTTCTCCATTGCTTCCTAGCGTAAACAGAGCCTTACTAGAGGTATTTGAAAGTGGAAAGCTGCgggaaatagaaaacaaaatgctTGCCGCAGAGAAATGTGAAGAGGCAGCAACAGATGGAGAAAGTACAAGTCTTAGCCCCCAGAGCTTCTGGGCACTCTTCATATTAACAGGAGGGACATCAACATTTGCTCTcttgatttatattattcGTATGAGTGATTCGGACCATGGAAAGAGAACAATGTGGAGATTGATGATGGTGATGATTCGACACTGGGTAGCTGATAAGAGAAGATTATCAAGAAGAGTCAGTGATGATGTAGAGCATGATCATTTAAACTCTCCACACACATCAGCGTTTCCTACTCAAGTTTA 2585 0.3981 MITKLIIANHAAADESSNISQVHVKGIIGAITDNSSRIGKEQIVAMKMALQDFYHRRNQTFVLHLMNSNGDPLQAAHAAKDLIDKDKVQAIIGPQTWEETALVAEICSQKNTPLIYLADATPKWGTDKWHFLVQGSPAQFMQMKAIAAIVQSWEWRQVTVIYEDRDSSSTGVLAHLTKALSQTGIEISDLLAIPPFVSSSLSHKLNSLREGQCRVFIVHLSFPLALHFFEMAKRMNMMEKGYVWLTTDTFSSFVHSLNASTISSMEGIIGVKSYFPKIGTQYEDFYHRFRQNFNLENPQEFNHEPGIFAARAYDVAWTTALAMTEANKGGQVFLDKIFQSNFTGLSGKFYFIDNKLAPEKSFQIINLMGKSHGELGFWTNGLDFSRSIGPNASYNRSMKELGQIIWPGRPWLTPRGWTIPTRDKPLRIGVPSLSLWKQLVQVIQDQSENTTSFQGFAIDLFRETVDLLPYHLPYQFYPFDDPSYDDLVKQVYLKNFEAVVGDVTIVADRYQYVEFSQPYTDSGFVMVVPLQSKAGNRTWLFLKPFTKIMWVLIGAMSVYNGFVLWLIEKNHCPELKGSLLNQSGTMMWLAFTTLISLHGDKLHSNLSRMTMVMWLFVALIITQSYTANLASMLTVERLEPTINDVEQLRNSNAMVGYTRGSFVKTYLHKVLHFNPENLKCLNSLEEYAEALRKKEIAAFFIKVAGSKIFLAKYCKEFTQAGPTYKVGGQGFAFPKGSPLLPSVNRALLEVFESGKLREIENKMLAAEKCEEAATDGESTSLSPQSFWALFILTGGTSTFALLIYIIRMSDSDHGKRTMWRLMMVMIRHWVADKRRLSRRVSDDVEHDHLNSPHTSAFPTQV 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01699 861 Pfam Bacterial extracellular solute-binding proteins, family 3 450 762 IPR001638 -
Bva07g01699 861 Gene3D - 537 674 - -
Bva07g01699 861 CDD GluR_Plant 424 764 - -
Bva07g01699 861 Pfam Ligand-gated ion channel 763 795 IPR001320 GO:0015276|GO:0016020
Bva07g01699 861 PANTHER GLUTAMATE RECEPTOR 17 852 - -
Bva07g01699 861 Gene3D - 710 771 - -
Bva07g01699 861 PIRSF IGluLR_plant 1 845 IPR017103 -
Bva07g01699 861 Gene3D - 436 536 - -
Bva07g01699 861 Gene3D - 311 429 - -
Bva07g01699 861 SUPERFAMILY Periplasmic binding protein-like II 402 762 - -
Bva07g01699 861 Gene3D - 141 302 - -
Bva07g01699 861 CDD PBP1_GABAb_receptor_plant 28 388 IPR044440 -
Bva07g01699 861 Pfam Receptor family ligand binding region 45 367 IPR001828 -
Bva07g01699 861 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 17 852 - -
Bva07g01699 861 SUPERFAMILY Periplasmic binding protein-like I 26 417 IPR028082 -
Bva07g01699 861 SMART GluR_14 427 766 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01699 Bva-Chr7 15934351 15937793 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01699 28 859 Ion Channels AT2G29110 34.822 1.13e-157 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01699 - - var:108332761 1090.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01699 07 15934351 15937793 Bva07g01699 07 15934351 15937793 ECH