Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01696 ATGATTACCATGTTAATTATAGCAAATCATGCAGCAGCTGATGAGAGTTCTAACATATCTCAGGTCCATGTTAAGGGCATAATAGGAGCTATTACAGATAACAGTTCTCGCATTGGAAAAGAGCAGATAGTGGCTATGAAGATGGCATTGCAGGATTTCTATCATCGCAGAAATCAAACCTTTGTTCTTCACCTAAGGAACTCTAAAGGGGATCCTCTTCAGGCAGCTCATGCAGCTAAAGATCTTATAGATAAAGACAAAGTGCAAGCCATCATAGGACCACAAACATGGGACGAGACAGCTTTGGTGGCTGAGATTTGCAGCCAAAAGAACACACCACTGCTTTCGTTAGCTGATGCAACTCCAGAGTGGGGAACAGATAAGTGGCACTTCCTTGTTCAAGGCTCACCTGCCCAGTTTATGCAGATGAAAGCTATAGCTGCTATTGTTCAGTCCTGGGAATGGCGTCAGGTTACAGTAATCTATGAAGACAGAGATTCTTCATCCACTGGAGTTTTAGCTCATCTCACAAAAGCACTCAGCCAAACTGGCATAGAGATAAGCGATCTTTTGGCCATCCCTCCTTTTGTTTCCTCTTCATTGTCCCATAAACTTAACAGTCTCAGAGAAGGACAATGTAGAGTCTTTATTGTCCATATGTCCTTTCCTTTGGCTCTTCACTTTTTTGAAATGGCAAAAAGAATGAACATGATGGAGAAAGGTTACGTATGGATCACCACTGATACCTTTTCTAGCTTTGTCCATTCCTTGAATGCATCCACTATCTCCTCCATGGAAGGGATTATAGGAGTCAAGAGCTACTTCCCAAAAATAGGGACTCAGTATGAGGATTTCTACCATAGATTTCgccaaaattttaacttagagAATCCTCAAGAGTTTAACCATGAGCCTGGGATCTTCGCAGCCCGGGCCTATGATGTTGCTTGGACTACGGCTCTGGCAATGACAGAAACCAATAAGGGTGGCCAAGTTTTGCTAGACAAGATTTTCCAAAGTAATTTCACTGGTTTAAGTGgaaaattttgcttcattgataataaattagcTCCTGAAAAGTTTTTCCAGATCATCAATCTAATGGGAAAAAGCTATGGGGAACTTGGATTCTGGACAAATGGACTGAATTTCTCACTAAgtattggaccaaatgcttCTTATAACCGTTCAATGAAGGAATTGGGACAAGTAATTTGGCCAGGGAGACCTTGGCATACTCCAAGAGGATGGACCATACCAACTAGAGATAAACCATTAAGAATTGGGGTCCCCTCTTTGTCTGCATGGAAACAGCTTGTCCAGATAATTCAAGATCAATCAGAAAATACTACCTTCCAAGGTTTTGCCATAGAACTTTTTAGAGAAACTGTAGATTTGTTACCATACCATCTACCATACCAATTCTATCCATTCAATGAATCATATGATGATTTGGTGAAGCAAATTTACTTGAAGAATTTTGAAGCAGTAGTTGGCGATGTCACAATAGTTGCAGAACGATATCAGTATGTTGAATTTTCTCAGCCCTACACCGATCCAGGAGTTGTGATGGTAGTCCCTCTTCAATCAAAAGCAGGCAATAGAACTTGGTTATTCCTGAAGCCTTTTACCAAGACCATGTGGGTTTTAATTGGGGCCATGGTTGTTTACAATGGTTTTGTTCTATGGCTGATGGAAAAAAACCACTGCCCTGAACTTAAGGGCTCTCTGCTAAATCAATCCGGGACCATGATGTGGTTGGCTTTCACCACTCTCATCTCCTTGCAtgGAGATAAGCTGCACAGCAATTTATCAAGGATGACTATGGTAATGTGGCTGTTTGTGGCTCTAATCATAACACAGAGTTATACGGCTAACCTCGCAAGCATGTTGACAGTGGAGCGGCTTGAACCCACAATAAATGATGTTGAGCAGCTAAGGAATAGCAATGCAATGGTTGGATATAGCAGAGGATCATTCTTGCAGACATATCTGCAGAAAGTATTACACTTCCACCCTGCAAACCTAAAGTATCTCAATTCATCGGAAGAGTATGCTGAAGCCCtcagaaggaaagaaatagcAGCTTTCTTCCTTGAAGTTGCTGTGTCCAAAATTTTCCTTGCAAAATACTGCAAAGAGTTTACTCAAGCTGGACCCATGTACAAAGTTGGAGGGCTAGGATTTGCATTCCCAAAGGGTTCTCCATTGCTTCCTAGCGTAAACAGAGCCTTACTAGAGGTATTTGAAAGTGGAAAGCTGCgggaaatagaaaacaaaatgctTGCCGCAGAGAAATGTGAAGAGGCAGCAACAGATGGAGAAAGTACAAGTCTTAGCCCCCAGAGCTTCTGGGCACTCTTCATATTAACAGGAGGGACATCAACATTTGCTCTcttgatttatattattcGTATGAGTGATTCGGACCATGGAAAGAGAACAATGTGGAGATTGATGATGGTGATGATTCAACAATGGGGAGCTCACAAGAGAAGATTCTCAAGAAGAGTCAGTGATGTTGTAGAGCATGATCATTTAAACTCTCCAAACACATCAGCGTTTCCTACTCAAGTTTA 2579 0.3998 MITMLIIANHAAADESSNISQVHVKGIIGAITDNSSRIGKEQIVAMKMALQDFYHRRNQTFVLHLRNSKGDPLQAAHAAKDLIDKDKVQAIIGPQTWDETALVAEICSQKNTPLLSLADATPEWGTDKWHFLVQGSPAQFMQMKAIAAIVQSWEWRQVTVIYEDRDSSSTGVLAHLTKALSQTGIEISDLLAIPPFVSSSLSHKLNSLREGQCRVFIVHMSFPLALHFFEMAKRMNMMEKGYVWITTDTFSSFVHSLNASTISSMEGIIGVKSYFPKIGTQYEDFYHRFRQNFNLENPQEFNHEPGIFAARAYDVAWTTALAMTETNKGGQVLLDKIFQSNFTGLSGKFCFIDNKLAPEKFFQIINLMGKSYGELGFWTNGLNFSLSIGPNASYNRSMKELGQVIWPGRPWHTPRGWTIPTRDKPLRIGVPSLSAWKQLVQIIQDQSENTTFQGFAIELFRETVDLLPYHLPYQFYPFNESYDDLVKQIYLKNFEAVVGDVTIVAERYQYVEFSQPYTDPGVVMVVPLQSKAGNRTWLFLKPFTKTMWVLIGAMVVYNGFVLWLMEKNHCPELKGSLLNQSGTMMWLAFTTLISLHGDKLHSNLSRMTMVMWLFVALIITQSYTANLASMLTVERLEPTINDVEQLRNSNAMVGYSRGSFLQTYLQKVLHFHPANLKYLNSSEEYAEALRRKEIAAFFLEVAVSKIFLAKYCKEFTQAGPMYKVGGLGFAFPKGSPLLPSVNRALLEVFESGKLREIENKMLAAEKCEEAATDGESTSLSPQSFWALFILTGGTSTFALLIYIIRMSDSDHGKRTMWRLMMVMIQQWGAHKRRFSRRVSDVVEHDHLNSPNTSAFPTQV 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01696 859 Gene3D - 688 769 - -
Bva07g01696 859 Gene3D - 138 380 - -
Bva07g01696 859 CDD GluR_Plant 424 762 - -
Bva07g01696 859 Gene3D - 535 670 - -
Bva07g01696 859 Gene3D - 35 360 - -
Bva07g01696 859 PANTHER GLUTAMATE RECEPTOR 17 852 - -
Bva07g01696 859 SUPERFAMILY Periplasmic binding protein-like I 26 417 IPR028082 -
Bva07g01696 859 Pfam Ligand-gated ion channel 761 793 IPR001320 GO:0015276|GO:0016020
Bva07g01696 859 Pfam Bacterial extracellular solute-binding proteins, family 3 448 760 IPR001638 -
Bva07g01696 859 Gene3D - 423 534 - -
Bva07g01696 859 SUPERFAMILY Periplasmic binding protein-like II 402 760 - -
Bva07g01696 859 CDD PBP1_GABAb_receptor_plant 28 385 IPR044440 -
Bva07g01696 859 SMART GluR_14 427 764 IPR001320 GO:0015276|GO:0016020
Bva07g01696 859 Pfam Receptor family ligand binding region 45 367 IPR001828 -
Bva07g01696 859 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 17 852 - -
Bva07g01696 859 PIRSF IGluLR_plant 1 848 IPR017103 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01696 Bva-Chr7 15922817 15927942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01696 28 857 Ion Channels AT2G29110 34.593 5.05e-157 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01696 - - var:108332761 1112.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01696 07 15922817 15927942 Bva07g01696 07 15922817 15927942 ECH