Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01686 ATGGGAGAAACCAATCACCAAGCAGCAACATCGTCGAGATTGGGGATAAGAAGTGGAGGTGGAGAAATCGTAGAGGTCCAAGGAGGTCTCATTGTACGCTCCACAGGACGCAAAGATCGTCACAGCAAGGTCTGCACAGCAAAAGGGCCACGAGATCGAAGAGTTCGTCTCGCTGCTCACACTGCCATTCAATTCTACGACGTGCAAGACCGTCTCGGCTACGACCGACCAAGCAAAGCCGTCGATTGGCTTATTCAGAAGGCCAAAAACGCCATAGACGAGCTTGCAGAGCTTCCCGCATGGCGCCCGACTACTTCTGTGTTGAACCAAAACGCTTCGCAGCAGAATCAGCAAGAGCAGCAGAACCAGCAGATGAACGAGGGGAACGACAACTACCCCCTTGGCGTCCGTCGTGCTACGGTGGACGCAATTTCTACTGGTAGCCGAAGAACTAGTTCGCTGGTGGGAAACGCAGTTGCCGGCGGTGGTGGGAGAATTGAAAGTGGTGTCCGGAATCTTCAGCAGCAATTGGGTGAAAACCCGAATAGCAGCGCGAATTTTCTTCCACCATCGTTGGATAACGACATTGCTGACACCATCAAGTCTTTCTTCCCAATTGGCGCGACGGCGGAGACATCGTCGCCGATTCAGTTTCAGAATTACCCACCAGATTTGCTCTCGAGAACTAGTAGCCAGAACCAAGATCTGCGGCTCTCGCTCCAGTCCTTCCAGGACCCAATTCTGCTTCACCAAGCCCAGCATCAGCAAGCTCAGACTCATCATCACCATCAGAACGAGCAAGTCTTTTTCTCCGGAACCCCACTTGGGTTCGACGGAACATCGACTGGGTGGTCAGAGCAGCACCACCCTGAGGAGCATGGTCGTTTGCACAGAATGGTAGCTTGGAATGCTGGTGCTGATACTGGCAACAGTGGGGGTGGCGTTAGCGGCGGTAGGGGCGGAGGATTTCTCTTCAATTCGCCCTCGCCAACGCCTCCTCAGATGCCTCCGCCGCTTCAGCCGTTGTTGGGAGGCCAAAGCCAGTATCTTTCTCAGAGGGGACCCCTTCAGTCCAGTAACACCCCTTCGATTCGTGCTTGGATCGACGAACCATCAATCACCACAGCCACCGTCACCGATCATCGCCACCACTATCTTCCACCGACAATTCATCATCAAACTTTTCTTTCGGGCATCGGATTCCCTATTTCCGGTGGGTTCTCCGGTTTCCGTATTCCAGCACGAATTCAGGGTGAAGAGGAACACGATGGCATAACTGACAAGCCGTCCTCTGCTTCCTCTGATTCTCGCCATTG 1316 0.5365 MGETNHQAATSSRLGIRSGGGEIVEVQGGLIVRSTGRKDRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIQKAKNAIDELAELPAWRPTTSVLNQNASQQNQQEQQNQQMNEGNDNYPLGVRRATVDAISTGSRRTSSLVGNAVAGGGGRIESGVRNLQQQLGENPNSSANFLPPSLDNDIADTIKSFFPIGATAETSSPIQFQNYPPDLLSRTSSQNQDLRLSLQSFQDPILLHQAQHQQAQTHHHHQNEQVFFSGTPLGFDGTSTGWSEQHHPEEHGRLHRMVAWNAGADTGNSGGGVSGGRGGGFLFNSPSPTPPQMPPPLQPLLGGQSQYLSQRGPLQSSNTPSIRAWIDEPSITTATVTDHRHHYLPPTIHHQTFLSGIGFPISGGFSGFRIPARIQGEEEHDGITDKPSSASSDSRH 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01686 438 MobiDBLite consensus disorder prediction 110 132 - -
Bva07g01686 438 PANTHER TRANSCRIPTION FACTOR TCP4 1 438 - -
Bva07g01686 438 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 438 IPR005333 GO:0003700
Bva07g01686 438 Pfam TCP family transcription factor 36 126 IPR017887 -
Bva07g01686 438 MobiDBLite consensus disorder prediction 419 438 - -
Bva07g01686 438 MobiDBLite consensus disorder prediction 110 130 - -
Bva07g01686 438 ProSiteProfiles TCP domain profile. 37 95 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01686 Bva-Chr7 15880374 15883622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01686 5 438 TCP Transcription Factor Family AT1G53230 46.325 6.07e-104 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bva07g01686 TCP 1.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01686 - - jre:108992497 489.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00910 09 4691278 4693117 Bva07g01686 07 15880374 15883622 ECH
Bva09g00689 09 3520801 3522848 Bva07g01686 07 15880374 15883622 ECH
Bva07g01931 07 17144668 17147874 Bva07g01686 07 15880374 15883622 ECH
Bva07g01686 07 15880374 15883622 Bva07g01686 07 15880374 15883622 ECH