Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01673 ATGTTACTGagtaaagaaatagaagatttGTGTGATGATAACTTTGAAGGATCTAATGATGAAAAGCGAATTTTCACTGATGTATTTTTTGGCAATGACATTTCTCAGTCTAGTCAGAGGTGTCTTGTTACTGGAGTTATAAACTTTGAATGTGAATCCAGCAAAAACACAATTACATCAGTTTGTTCCAATAATGAAAACTTAGTTATAACGAGTCCCTCTGCTTCAAAAGTTACTCATCCTGAAGGCTATAATGTTATTTGGGATTCTAAAGAGGCTTCTCGAGGGTGTATACCAGAGTGGTTCAATTATGGAGACCAGAATGAAGAGGATGTGAATGTCAAACGTATGAAATTTTCTCTGGATGAACTTCCTTGTAGTTCATCTGGTTTAGAAAATCATTTGAATTCTTCTACGTTTTCAAAGGAACTTGTTTCTGAAAAGTCTTGTCCTGCCACAGATGGTGGTAATAAACCAATTGCCTTTCGTTTAGTTGAATCATCAAAGCATGGTGTGATATCTAGTTGCTATCTCTTGAACCATAACATGGTACTAAATAAGCAAACTTCAGGGGATGAATTAGATAttgtaaattgtaaattaGCAAATGCAGATGGGAATGTTGCAAAGGAAGTGGCTGGACATAAAGTGGTCGCCTCTCCTGTTTCCCAGGAGAGCTTTGCAAACCGGCTTGCAGTCACAAGTCCATCTATCACTGTCACGGAGAAGTCTGGATCTCCTTTACTTCCAGAGGAAAACCCCCAAGGATTCCTATCTTCTGATATGGATATGACAAATGGATCCTTGGAACCAGGATTTAAAAATGATCCTCGTACTTTGTTGCAGTATCATATTGTGCAGTTGCTTATAATGGCTGGATGGTCTATTGAGAAGCGTAAAAGACCTTGTAGGCGTTACTTTGAGTCAGTTTATAGGACACCAGAGGGAAGGCCAGTTCGTGAGTTTACCAAAGCTTGGAGGCTGTGTGGTCAGCGTTTGTCTGTTGATAAATGCAATCTGGTGCATGAAGATTTGAAGGAATGGACTGATATTAGTCAGTTCTGGTCTGATCTATGCAGTGCAATGGCAAGTGTTGAAAAGGGGCAGAACCAGTCAGAGACCACTGCTATCTTGGCTCATCAATGGTGGCTTTTGGATCCCTTTGTAAAAGTCATATACGTTGACAGAAAGATTGGTGCACTGAAAAAGGGAGAGATAGTAAAAGCAAATCGGAATTTAGTTTCTGGTAACTATAATATGGTATGTGGGTCCTTTGATTCAGTTGGTGTGAATTCTTCTGGAGCTGAGTTTAATCAGAAACATGACTCAGCTTCACTTTGTGATTCTTCTACTGTCATTGTAAGTGCATCAACAGCTTCTATGCGAAAGTACCCTACCCGTAATATAAATTCTGATGATGGAAACTTCTCGGAGTACAGGGGACAGACAAAAACTGGGGTTGTAAAACTTCCTATTGTATCATCTGATAGTATTGAAAACCAAGAGGACAGGAAAGGCTTGAAATCTCTGGTTTATTCTCATGGCTCAAGGGCTGTTCAAGAGTCTGAACATTTTGAGGAAGGGGATAGGAAAGGCTTGAAAGCTTCTGCATTTGAAACAGATAATACATGTGCTGCATTCAATattaccataaaaaagaagatgcGGAGGAAGTGTAAAAGGGTATCTGAAATCAAACTGAGTATGTTATACCAAAGTAACTTGTCAGGTTCTACTGTTTGTGAACAGGTCCAGTCGCAGAATGGTGATGCATGTGACCCTCAGTTATTATCGGAAGAGGCACAGGAGGATCTAGTTGGCAACGGAGGAAAGAGAGGAAGCTGCAAGAAGTTATCATCTGTCAGTTCTTTCCAGcagcagaagagaaaaagaaactcaaattttagaaAGATTTGTCGCAAGTATGACTCTAGAAATGCAAAGAAGGAATCCCCTGAATGCCagattgatgatgatgatctgTTGGTTTCTGCTATTATCAAGAATAAGGATTTCATTCCAAAGCCAGCCCAAGGTAGTTCTCGAGGTAAATCCTGTAAATCAAGAGCCcagaggaaaatgaaaagccAAAAGGGTCGTTGCAGGTTGCTACCAAGGAACCTTGGTAATGGAGGCAATCACATTAAGGATGCCAAGAAAAATTCTATGGGGACAAGAACAGTATTGTCCTGGTTGATTGAGAATGGGTTGATATCATTAAATGATGTGATCCAATACCGTAACCCAAAAGATAATACTGTTGTTAAGGGCGGTAGAATTTCCATGGATGGTATTATTTGTAGCTGTTGTAGTAATGTGTACACGTTATCTGAGTTCAAGTTTCATGCTGGGTTTAGACTGAATCGCCCCTGTTTGAACCTTTTTATGGAAACTGGTGAGCCCTTTACATTGTGCCTGCTTCAAGCTTGGTCAGCTGAATACAAGACCAGGAAAAGTGGGAATCGAGCTGTGCAAGTTGATGACGatgataaaaatgatgattcGTGTGGGTTGTGCGGTGAGGGGGGTGAGCTGATATGCTGTGATAGCTGTCCATCTACTTATCATCTGGCTTGTTTGTCCAGACAGGAGCTCCCTGAGGGCAATTGGTACTGCACAAACTGCACCTGTTGGATATGTGGGAATTTGGTCATTGATAAAGAGGCTTCGGGTTCTTACAATACATTGCAGTGTTGTTCTCAGTGTGAACATAAATATCATGAGGAATGCCTTAAAGAAAGAGGTAAACCAGAAGCAGCAGTTTCAGATATTTGGTTTTGCGGTGGTAGTTGTCAGGAGGTATATTCTGGGCTTCAATCTCGTGTAGGGTTTACCAATAATATTGCTGATGGCTTCTCATGGATGCTACATAAATGTATCCACGATGACCAAAAGGTTCATTCTGCCCAGTGGCTTGCACTGAAGGCAGTATGCAATACAAAATTAGCTGTCGCGCTTACTATCATGGAGGAATGCTTTTTGTCCATGGTAGATCCAAGAACAGGCATAGACATGATTCCCCAGGTTTTATACAATTGGGGGTCTGATTTTGCTCGGCTGAATTTTCAAGGGTTTTACACTGTGGTATTGGAGAAACAAGATGTGTTAATATCTGTAGCATCTATCAGGGTGCATGGAACTACAGTTGCAGAGATGCCTCTTATTGCAACTTGTAGTCGGTATCGCCGTCAGGGAATGTGCCGACTCCTTGTGAGTTCAATTGAAGAGATGCTAACATCTTTCAAGGTTGAAAAGCTTGTAATAGCAGCCATTCCAGATATAATGGAGACATGGACGGAAGGTTTTGGGTTCAGACCTGTGGATGACGTTGAAAAGCGAAGATTGAGCAAGTTCAATTTGATGGTTTTTCCTGGAACAATACTTCTTGAAAAGCCTTTGTATGGAAAGGAGAAAGTAGAAGGACCGTATGATTCATCAACTTCAGCAATGGATAAATCGACCAAAGTCGACGGCTGTTCCAAGGGAAAGCCCATGGCTGAATCATCACAGCAAGATGTGGGAAACACCAATAATAACAAGGTTGGTGCTATGTCAAAAACTGAACATTTGGGTGGCAAGAATGACCCAGACCACGGAGATGGTAGTAAAATCGACATAGATGGTAATATGCAAGCTAATGACACGTCATTAGGAGCACAGGAATCAACCGAAGAAAGTGCCTGTTCCAAAAGAGAGATGTTTGATTCTGTAAAGCAATCTGATGGCTCGGAGAATTCCATGGAGGGAAGCAATCTGCACGAAATGAGAATTAGCAGCAATATGCAAACCGTGGTCGAGTCTGTCCAGCAGTTTAGTGGGAACCGTTGCACTAACAAATATAATGTCGACCATGAAGTAGGAATTATTGAGGACAAGAATGTTAATGTAGGCGAAGATCTGGGAAATACGAAGTTGTCCTGCACAGTATTTTTAgacagaaaatttgaaatggatTCAAATATTGAATCCTCAGGGATGTATGATGAAACACAGCCTTCTTTGGAACAGCATTTGCAGGAAAATTA 4025 0.3965 MLLSKEIEDLCDDNFEGSNDEKRIFTDVFFGNDISQSSQRCLVTGVINFECESSKNTITSVCSNNENLVITSPSASKVTHPEGYNVIWDSKEASRGCIPEWFNYGDQNEEDVNVKRMKFSLDELPCSSSGLENHLNSSTFSKELVSEKSCPATDGGNKPIAFRLVESSKHGVISSCYLLNHNMVLNKQTSGDELDIVNCKLANADGNVAKEVAGHKVVASPVSQESFANRLAVTSPSITVTEKSGSPLLPEENPQGFLSSDMDMTNGSLEPGFKNDPRTLLQYHIVQLLIMAGWSIEKRKRPCRRYFESVYRTPEGRPVREFTKAWRLCGQRLSVDKCNLVHEDLKEWTDISQFWSDLCSAMASVEKGQNQSETTAILAHQWWLLDPFVKVIYVDRKIGALKKGEIVKANRNLVSGNYNMVCGSFDSVGVNSSGAEFNQKHDSASLCDSSTVIVSASTASMRKYPTRNINSDDGNFSEYRGQTKTGVVKLPIVSSDSIENQEDRKGLKSLVYSHGSRAVQESEHFEEGDRKGLKASAFETDNTCAAFNITIKKKMRRKCKRVSEIKLSMLYQSNLSGSTVCEQVQSQNGDACDPQLLSEEAQEDLVGNGGKRGSCKKLSSVSSFQQQKRKRNSNFRKICRKYDSRNAKKESPECQIDDDDLLVSAIIKNKDFIPKPAQGSSRGKSCKSRAQRKMKSQKGRCRLLPRNLGNGGNHIKDAKKNSMGTRTVLSWLIENGLISLNDVIQYRNPKDNTVVKGGRISMDGIICSCCSNVYTLSEFKFHAGFRLNRPCLNLFMETGEPFTLCLLQAWSAEYKTRKSGNRAVQVDDDDKNDDSCGLCGEGGELICCDSCPSTYHLACLSRQELPEGNWYCTNCTCWICGNLVIDKEASGSYNTLQCCSQCEHKYHEECLKERGKPEAAVSDIWFCGGSCQEVYSGLQSRVGFTNNIADGFSWMLHKCIHDDQKVHSAQWLALKAVCNTKLAVALTIMEECFLSMVDPRTGIDMIPQVLYNWGSDFARLNFQGFYTVVLEKQDVLISVASIRVHGTTVAEMPLIATCSRYRRQGMCRLLVSSIEEMLTSFKVEKLVIAAIPDIMETWTEGFGFRPVDDVEKRRLSKFNLMVFPGTILLEKPLYGKEKVEGPYDSSTSAMDKSTKVDGCSKGKPMAESSQQDVGNTNNNKVGAMSKTEHLGGKNDPDHGDGSKIDIDGNMQANDTSLGAQESTEESACSKREMFDSVKQSDGSENSMEGSNLHEMRISSNMQTVVESVQQFSGNRCTNKYNVDHEVGIIEDKNVNVGEDLGNTKLSCTVFLDRKFEMDSNIESSGMYDETQPSLEQHLQEN 1341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01673 1341 PANTHER INCREASED DNA METHYLATION 1 518 1331 - -
Bva07g01673 1341 PANTHER PHD FINGER PROTEIN 12 518 1331 IPR042163 GO:0003714|GO:0045892
Bva07g01673 1341 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 820 891 IPR013083 -
Bva07g01673 1341 Pfam PHD-finger 836 877 IPR019787 -
Bva07g01673 1341 MobiDBLite consensus disorder prediction 1139 1249 - -
Bva07g01673 1341 CDD PHD2_CHD_II 835 875 - -
Bva07g01673 1341 MobiDBLite consensus disorder prediction 1323 1341 - -
Bva07g01673 1341 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 985 1110 IPR016181 -
Bva07g01673 1341 SMART PHD_3 877 932 IPR001965 -
Bva07g01673 1341 SMART PHD_3 835 876 IPR001965 -
Bva07g01673 1341 ProSiteProfiles Zinc finger PHD-type profile. 833 878 IPR019787 -
Bva07g01673 1341 PANTHER PHD FINGER PROTEIN 12 1 472 IPR042163 GO:0003714|GO:0045892
Bva07g01673 1341 MobiDBLite consensus disorder prediction 1164 1184 - -
Bva07g01673 1341 MobiDBLite consensus disorder prediction 1190 1204 - -
Bva07g01673 1341 PANTHER INCREASED DNA METHYLATION 1 1 472 - -
Bva07g01673 1341 MobiDBLite consensus disorder prediction 1322 1341 - -
Bva07g01673 1341 ProSitePatterns Zinc finger PHD-type signature. 836 875 IPR019786 -
Bva07g01673 1341 MobiDBLite consensus disorder prediction 1208 1224 - -
Bva07g01673 1341 Pfam Tify domain binding domain 758 808 IPR032308 -
Bva07g01673 1341 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 984 1134 IPR000182 GO:0016407
Bva07g01673 1341 SUPERFAMILY FYVE/PHD zinc finger 822 876 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01673 Bva-Chr7 15803399 15812849 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01673 1 1134 PHD Transcription Factor Family AT3G14980 42.230 0.0 809
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bva07g01673 TDBD 3.6e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01673 - - gmx:100777440 1524.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01673 07 15803399 15812849 Bva07g01673 07 15803399 15812849 ECH