Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01671 ATGTCACATCCTGGGAAGCCCATTTCCGAGCTAGGGTTCGATGCTCTGAACGATCGTTTCCGTGACTCACTCAGTTGCGAAGCTAACAAACCGGATTTTCGAGAACTCGATCTGGGTTCACCGGTTTCGCCATTGCGGACTCGTCAGAGTGGACCAGCTGCCAGTGGTCTCACCACCACTACTACCAGCAGTAGTTCCAGCTCATCTGGGTCAGTCTCTGGGCGAAATGGGTGCAACCCAGTTGCGAAAAGGTCCCATTCTGGTCCGAACAACCACTCCGGCGAGCTCTCGGGCTCTAGCGAGAACAGTCCCACTGCCGCAGAGAGTCTACGATCTGCGGGGAATACGAGGAACTTCAAACCGGGTCACTCAAGATCCGATACAGGGACCACCCAACCTTTAATATATTCTGGTCAAAGTTCCGTGAATTCACCGCCGCTCAATGTCCTTCCCACTGGTAACATCTGCCCATCGGGGAAGATTCTGAAGACGGGTATGGCTTCCAGTCGGAGCTCCAGAACCGACGTTTTGGGCTCCGGCATGGGGAATTACGGTCATGGAAGCATAATGCGGGCCGGTGCCGCTGCCAAAGGTTGTGCTGGAGAGGCTACGGGTGCTATGAATGCGAGGGTAACGAGTGGCGGCAGTATCCATGACCCGGTGAAGAGAGCGGTGCAGAGTGTGGATCCAGAAGAGTTGAAGAGAGCAGGGAACGAGCAGTATAAAAGGGGGCACTTTACAGAGGCATTGAGTCTATATGATCGGGCAATTGCATTGTCTCCGGCCAATGCTGCCTACCGGAGCAATCGGGCGGCGGCATTGACGGGTTTGGGAAGGTTAGCCGAGGCAGTGAGGGAATGTGAGGAGGCTGTGAGGTTGGATCCTAATTATGTAAGGGCTCATCAGCGTTTGGCGTCACTTTATATAAGGTTAGGACAGGTTGAGGATGCTAGGAAGCACCTAAGTTATCCGGGGCTGCGTCCAGATCCATCTGAGTTGCATAAGTTGCAATTGGTGGAGAAGCATATCAGCAAATGTACAGATGTCCGGAGGATAAGTGATTGGAAAAGTGTTCTCAGGGAAATTGATGCTGTTGTTGCTGCTGGAGCCGATTCTTCTCCTCAGCTCTTTATGTGTAGAGCAGAAGCCCTTTTGAAGCTACACCAGATTGATGATGCTGAGTCAAGTCTCTTGAATATACCGAAATTGGAACAACGTACTAATTCCTCTTCCCAGGCAAGATATTTTGGGATGCTTTCTGAAgcatatttcttctttgttcgAGCTCAGATTGAGATGGCTTTAGGAAGGTTTGAGAATGCAGTTACAGCTGCTGAGAAAGCTGGGCAAATTGATCCACGAAACATTGAAGTTGCTGTGTTGCTCAAGAATGTAAGGATGGTGGCTAGAGCTCGAGCACGTGGCAATGATCTTTTCAAATCTGAAAGGTTTACCGAAGCTTGCTCAGCATATGGGGAAGGTTTAAGGCTGGACACTTCAAATTCTGTTCTCTATTGCAATAGAGCAGCTTGTTGGTTTAAGCTTGGGCAATGGGAGAGATCAATTGAAGACTGTAATCAGGCTTTAATTATCCAACCAAACTACACAAAAGCCCTTCTTCGAAGAGCTGCCTCAAACAGCAAGCTAGAAAGATGGGAAGAAGCAGTCAAAGATTATGAGATTTTGCGGAGAGAACTTCCAGATGACAATGAGGTCGCTGAAGCTCTCTTTCATGCCCAAGTGGCATTAAAGAAATCTCGTGGGGAAGAAGttcataatttgaaatttggcGGTGAAGTAGAAGTAGTATCAGGACTTGATCAGTTTAGAGCTGCAATATCTTTACCAGGTGTTTCTGTTGTCTATTTTGAAACTGCATCTGACTCCCAATGCAAGCAACTATCTCCATTTGTGGATACTCTATGTGGCCGGCATCCATCTATGAACTTCCTCAAGGTGAATATTGAAGAGAGCCCAACAGTTGCCACAGCTGAGAATGTCCGCATTGTACCAACTTTCAAGATCTACAAAAACGGGAGTCGAGTGAAGGAGATTGTATGCCCTAGTCGTGATATGTTGGAACTTTCTGTGAGGCATTATAGCATTTA 2108 0.4749 MSHPGKPISELGFDALNDRFRDSLSCEANKPDFRELDLGSPVSPLRTRQSGPAASGLTTTTTSSSSSSSGSVSGRNGCNPVAKRSHSGPNNHSGELSGSSENSPTAAESLRSAGNTRNFKPGHSRSDTGTTQPLIYSGQSSVNSPPLNVLPTGNICPSGKILKTGMASSRSSRTDVLGSGMGNYGHGSIMRAGAAAKGCAGEATGAMNARVTSGGSIHDPVKRAVQSVDPEELKRAGNEQYKRGHFTEALSLYDRAIALSPANAAYRSNRAAALTGLGRLAEAVRECEEAVRLDPNYVRAHQRLASLYIRLGQVEDARKHLSYPGLRPDPSELHKLQLVEKHISKCTDVRRISDWKSVLREIDAVVAAGADSSPQLFMCRAEALLKLHQIDDAESSLLNIPKLEQRTNSSSQARYFGMLSEAYFFFVRAQIEMALGRFENAVTAAEKAGQIDPRNIEVAVLLKNVRMVARARARGNDLFKSERFTEACSAYGEGLRLDTSNSVLYCNRAACWFKLGQWERSIEDCNQALIIQPNYTKALLRRAASNSKLERWEEAVKDYEILRRELPDDNEVAEALFHAQVALKKSRGEEVHNLKFGGEVEVVSGLDQFRAAISLPGVSVVYFETASDSQCKQLSPFVDTLCGRHPSMNFLKVNIEESPTVATAENVRIVPTFKIYKNGSRVKEIVCPSRDMLELSVRHYSI 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01671 702 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 14 700 IPR044534 -
Bva07g01671 702 Gene3D Tetratricopeptide repeat domain 228 588 IPR011990 GO:0005515
Bva07g01671 702 SMART tpr_5 264 297 IPR019734 GO:0005515
Bva07g01671 702 SMART tpr_5 468 501 IPR019734 GO:0005515
Bva07g01671 702 SMART tpr_5 230 263 IPR019734 GO:0005515
Bva07g01671 702 SMART tpr_5 536 569 IPR019734 GO:0005515
Bva07g01671 702 SMART tpr_5 422 455 IPR019734 GO:0005515
Bva07g01671 702 SMART tpr_5 502 535 IPR019734 GO:0005515
Bva07g01671 702 SMART tpr_5 374 407 IPR019734 GO:0005515
Bva07g01671 702 Pfam Tetratricopeptide repeat 425 454 IPR019734 GO:0005515
Bva07g01671 702 ProSiteProfiles TPR repeat profile. 422 455 IPR019734 GO:0005515
Bva07g01671 702 SUPERFAMILY Thioredoxin-like 505 700 IPR036249 -
Bva07g01671 702 MobiDBLite consensus disorder prediction 27 149 - -
Bva07g01671 702 SUPERFAMILY TPR-like 230 458 IPR011990 GO:0005515
Bva07g01671 702 Pfam Tetratricopeptide repeat 278 337 - -
Bva07g01671 702 Pfam Tetratricopeptide repeat 504 535 IPR001440 GO:0005515
Bva07g01671 702 Pfam Thioredoxin 608 688 IPR013766 -
Bva07g01671 702 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN TTL1 14 700 - -
Bva07g01671 702 MobiDBLite consensus disorder prediction 43 149 - -
Bva07g01671 702 CDD TRX_family 607 694 - -
Bva07g01671 702 Gene3D Glutaredoxin 594 701 - -
Bva07g01671 702 ProSiteProfiles TPR repeat profile. 230 263 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01671 Bva-Chr7 15783563 15787680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01671 467 612 U-box Gene Family AT3G07370 28.415 1.09e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01671 - - csv:101208569 1041.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01671 07 15783563 15787680 Bva07g01671 07 15783563 15787680 ECH