Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01578 ATGCCTGGGAATAAGTATAACGGTAATACTCAACACTTTCCAGGTCGTCTTGAGCGACTTCTAAGAGACAGAGAGCTAAGAAAAAGCAGTAGGGCTTCTCATTTGAATGAGTCAactgataataataattgggTTACTGAACCTTTTGAGCATGAGCAGCGCTTAAGGGAAGAAAACAACTCAGTTAATTCCTATGTTGAACAATTCCTCGAAGCGGCTGCAGCCGCAAGGGCGTATGGTGAGGGATGCGAAAGGCAAGACGGGAGACCTTTAAGGCAGCGACTTTTGGTGGTGGCCAACAGGCTGCCAGTCTCGGCAGTTAGGAAAGGTATAGACTCATGGTCCCTGGAGATAAGTGCTGGTGGTCTAGTGAGCGCTCTTTTAGGTGTCAAGGAGTTTGAGGCAAGGTGGATAGGTTGGGCAGGTGTCAATGTGCCAGATGAGATTGGACAAAAGGCACTTACTAAAGCTTTGGCCGAAAAGAGGTGTATCCCAGTATTTCTTGATGAAGAAATTGTTCATCAATATTATAATGGTTACTGCAACAACATCTTGTGGCCCCTTTTTCATTACCTTGGACTTCCACAAGAAGATCGCCTTGCCACCACTCGGAGTTTCCAGTCTCAGTTTGCAGCATATAAGAATGCAAATCAAATGTTTGCTAAAGTTGTGAACATGCACTACGAAGAGGGTGATGTCGTTTGGTGCCATGATTACCATCTTATGTTTCTTCCAAAATGCTTAAAGGAATATAACAGCAAAATGAAAGTTGGCTGGTTCCTCCACACTCCATTTCCATCTTCTGAAATTCATAGGACACTGCCATCTCGTTCTGAGCTCTTGCGTTCTGTCCTTGCAGCCGATTTAGTCGGTTTTCACACCTATGATTATGCAAGGCATTTTGTTAGTGCTTGTACTCGCATCCTTGGACTTGAGGGTACGCCTGAAGGAGTTGAGGACCAAGGGAGACTGACTCGAGTTGCTGCATTTCCAATTGGGATAGATTCAGAACGATTCATACGTGCACTTGAGCTTTCTCAAGTCCAGGAGCAcgttaaagaattaaaagaaagatttaaAGGCAGAAAGGTAATGTTAGGCGTCGATCGCCTTGATATGATTAAAGGAATTCCTCAGAAAATTCTagcatttgaaaaatttttagAAGAGAATTCTAATTGGCGTGATAAAGTAGTACTGCTTCAAATTGCCGTGCCAACAAGAACAGATGTTCCTGAGTACCAGAAGCTAACAAGCCAGGTTCATGAGATTGTTGGTCGTATTAATGGCAGATTTGGATCACTGACTGCTGTTCCCATACATCACCTGGATCGTTCTCTTGACTTTCTTGCACTATGTGCTTTGTATGCTGTTACTGATGTAGCACTTGTCACATCTTTAAGGGATGGAATGAATCTTGTCAGTTATGAATTTGTGGCCTGCCAGGGTCAAAAGAAGGGGGTTCTCATTCTCAGTGAGTTTGCTGGTGCTGCCCAGTCTCTAGGTGCTGGAGCAATTCTAGTTAACCCCTGGAACATCAGTGAAGTTGCTAATGCAATTGACCAGGCTCTGAATATGACAtctgaagaaagagagaaacgACATAAGCATAACTATTCACATGTAAAAACCCACACTGCTCAGGAATGGGCAGAAACTTTTGTGAGTGAACTAAATGATACTGTCGTTGAAGCACAACTAAGGACTAGACAAGTTCCACCCCCGCTTCCAACCAAGACTGCAATTGAGCGTTATCTGCAGTCAACCAATCGATTACTCATTTTGGGATTCAATGCAACTTTAACTGAACCAGTTGATAGAAAAGGTGATCAGATTAGAGATATGGAACTCAAGGTGCATCCAGAATTGAAACAACCCCTGACAGCACTTTGCAGTGATCCGAAGACCACAGTAGTTGTGCTTAGTGGAAGTGTGAGAGGTGTCTTAGATAATAACTTTAAGGAGTATGACATGTGGTTGGCAGCAGAGAATGGGATGTTTTTAAGGCATACAAGAGGAGAATGGATGACAACAATGCCAGAGCATCTGAATATGGAATGGGTTGACAGTGTGAAGCATGTTATTGAGTACTTCACTGAAAGAACACCCCGATCACATTCTGAACACCGGGAAACTTCACTTGTATGGAATTACAAATATGCagATATCGAATTTGGAAGACTTCAAGCCAGGGACATGTTGCAGCATCTCTGGACAGGTCCAATTTCTAATGCATCAGTAGACGTTGTTCAAGGTAGCCGATCTGTCGAGGTGCGAGCTGTCGGTGTTACAAAGGGAGCAGCTATCGACCGCATCTTGGGTGAGATAGTCCACAGTAAATCCATGACATCACCAATTGATTATGTCCTTTGTATAGGACATTTTCTTGGAAAGGATGAAGATGTTTATACCTTTTTTGAGCCAGAGCTTCCTTCTGACGGCTTGGGTCTCCCAAGAACCAAGGTAACAGATGGTGTTAAGTTTCCTGGTGAGAGAAAATCATCATTGAGGATTCCAGCAAGTAAAAATGGACACAAGTCTTCTCCAAACAAGACACAAAAATCTCTGCCGAGTTCTGAGAAGAAATCCAACAATCACGTCTGCAGTGCAACACGGCGGCCGGCAGCTGAGAAGATCTCATGGAACGTCCTTGACCTCAAGAAGGAAAATTACTTCTCTTGCGCTGTTGGGCGAACTCGGACAAGTGCCCGCTATACGCTTGGATCATCGGATGACGTAGTTAGATTTCTGAATGAACTTGCAGATGCAACCACTCCAAACTTTTCAtcatttagtta 2798 0.4257 MPGNKYNGNTQHFPGRLERLLRDRELRKSSRASHLNESTDNNNWVTEPFEHEQRLREENNSVNSYVEQFLEAAAAARAYGEGCERQDGRPLRQRLLVVANRLPVSAVRKGIDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKNANQMFAKVVNMHYEEGDVVWCHDYHLMFLPKCLKEYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALELSQVQEHVKELKERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENSNWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTAVPIHHLDRSLDFLALCALYAVTDVALVTSLRDGMNLVSYEFVACQGQKKGVLILSEFAGAAQSLGAGAILVNPWNISEVANAIDQALNMTSEEREKRHKHNYSHVKTHTAQEWAETFVSELNDTVVEAQLRTRQVPPPLPTKTAIERYLQSTNRLLILGFNATLTEPVDRKGDQIRDMELKVHPELKQPLTALCSDPKTTVVVLSGSVRGVLDNNFKEYDMWLAAENGMFLRHTRGEWMTTMPEHLNMEWVDSVKHVIEYFTERTPRSHSEHRETSLVWNYKYADIEFGRLQARDMLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMTSPIDYVLCIGHFLGKDEDVYTFFEPELPSDGLGLPRTKVTDGVKFPGERKSSLRIPASKNGHKSSPNKTQKSLPSSEKKSNNHVCSATRRPAAEKISWNVLDLKKENYFSCAVGRTRTSARYTLGSSDDVVRFLNELADATTPNFSSFS 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01578 932 Gene3D Glycogen Phosphorylase B; 87 341 - -
Bva07g01578 932 CDD HAD_TPP 592 809 - -
Bva07g01578 932 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 94 559 IPR012766 GO:0003825|GO:0005992
Bva07g01578 932 Gene3D Glycogen Phosphorylase B; 342 544 - -
Bva07g01578 932 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 26 920 IPR001830 GO:0003824|GO:0005992
Bva07g01578 932 SUPERFAMILY HAD-like 591 921 IPR036412 -
Bva07g01578 932 MobiDBLite consensus disorder prediction 817 871 - -
Bva07g01578 932 Pfam Trehalose-phosphatase 614 813 IPR003337 GO:0003824|GO:0005992
Bva07g01578 932 Pfam Glycosyltransferase family 20 94 559 IPR001830 GO:0003824|GO:0005992
Bva07g01578 932 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 26 920 - -
Bva07g01578 932 MobiDBLite consensus disorder prediction 840 870 - -
Bva07g01578 932 CDD GT20_TPS 94 559 IPR001830 GO:0003824|GO:0005992
Bva07g01578 932 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 93 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01578 Bva-Chr7 15251467 15264735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01578 1 925 Trehalose Biosynthesis Gene Families AT1G78580 80.063 0.0 1528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01578 K16055 - egr:104450066 1554.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00979 09 5032885 5043756 Bva07g01578 07 15251467 15264735 ECH
Bva07g01578 07 15251467 15264735 Bva07g01578 07 15251467 15264735 ECH