Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01572 ATGGAACATCTTGTTAATATGCACCGCCATCTACTTGACAAGGAGCTAAGCTTCTCACCGGCGACAAACAAGACACGTGAATCTTTCATGGTCAATGTGAATTTTGACACCAACATGGTGATGGCACTGACCGCTTTGTTGTGTGCACTAATATTTGCTCTTGGGATGAACTCAATTCTGCGCTGTGCTAGGCGTTGTGGCCATAGATTTCCCACGGAGACACAACTGCAAACAACTTCAAGGCTTTCTAGTACTGGCCTAAAAAAGCGTGATTTGAGTCAGATTCCGGTGGTTGTGTACGGCTTCGCTGTGGATATTCCGGCGACGGAGTGCCCCATTTGTCTTGCGGAATTCGAGAAGGGAGACAAGGTCCGATTGCTGCCACAATGCAATCATGGGTTCCATGTGTGGTGCATAGATAAGTGGCTAGTGTCACATTCTTCTTGCCCAAATTGTCGCCTTTCACTGCTTGAGCAATCTACTTCAACAAATTCAAGTGCAAGTCACGAAGTTGCCGGAAATCGGGCAGTGGGAGATGGTTCCGGCCGGCAAGATAATGTTGTTGTGGTTGCCGACCAGGCAAGCTG 587 0.4821 MEHLVNMHRHLLDKELSFSPATNKTRESFMVNVNFDTNMVMALTALLCALIFALGMNSILRCARRCGHRFPTETQLQTTSRLSSTGLKKRDLSQIPVVVYGFAVDIPATECPICLAEFEKGDKVRLLPQCNHGFHVWCIDKWLVSHSSCPNCRLSLLEQSTSTNSSASHEVAGNRAVGDGSGRQDNVVVVADQAS 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01572 195 Pfam Ring finger domain 110 153 IPR001841 -
Bva07g01572 195 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 7 191 - -
Bva07g01572 195 CDD RING-H2_PA-TM-RING 110 153 - -
Bva07g01572 195 PANTHER RING-H2 FINGER PROTEIN ATL74 7 191 - -
Bva07g01572 195 SMART ring_2 111 152 IPR001841 -
Bva07g01572 195 ProSiteProfiles Zinc finger RING-type profile. 111 153 IPR001841 -
Bva07g01572 195 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 87 163 IPR013083 -
Bva07g01572 195 SUPERFAMILY RING/U-box 96 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01572 Bva-Chr7 15223268 15225265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01572 7 162 C3H Transcription Factor Family AT3G10910 50.909 2.90e-49 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01572 K19040 - rcu:8274929 236.113