Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01560 ATGTGGCCACAATTCTGTTTGAAATGCTTCCAGAAATGGATAGGACAGGGGAAACAGACTTGTGCAAAGTGTCGCGGCCCTATCCCTCAGAAAATGTCAAGCCAGCCACGTATGAATTCTGCCCTTGTATCTGCCATTCGAATGGCAAAGGTCTCCAAGAGTGTCACTTCTCTAGAGCCTTCCAAAGTTTTTCATTGTCTACATAACCAAGACAGGCCTGACAAGGCATTTGCCACAGAGAGGGCACGAAAGAGTGGGAAGGCTAATGCTGCAAGtggaaaaattttgttactgTGCCAAAGGACCATTTCGGGCCAATCCCGCTTGAGAATGATCCGGTGCAAAATCGAGGCGTGCTTGTTGGTGACACGTGGGAGGACAGGTCAGTCCAATCATGGTGCACAATCAGTTGTTCTGTCGGGAGGTTATTTGGAAGATGAAGACCATGGAGAGTGGTTTTTCTATACCGGAAGTGGTGGTAGGGATTTACATGGCAATAAACGAACTGCCAAGGAACAATCTTTTGATCAAAAGTTTGAGAAGTACAACAAGGCGCTCCAAGTAAGTTGTTTGAAGGGTTATCCGGTTAGGGTTGTGAGAATTGAAAAGTGTTGGCAGAAAGTGGGATTGCAGGTTTGCCAGTATTTGTTTATTAGATGTGATAATGAACCTGCTCCTTGGACAAGGTATGAGTACGAAGCTTACACAGTGACGATCTTTAAATGGAAACACAGTGACGATCATGGTGATCGACCTAGACCCTTGCCGGCAATCTCAGAGCTGACAAATGTTGAAAAAGtatttgaaaggaaagaaactcCTTCTTGGGATTTTGATGAGAAAGACTTTCGTTGGAAGTGGAAGAAATGTCCTCCCAGTAAAAAATCGGTCAAAAGTGGAGATCCCAAGGACATTAAAAGGGCAAGAAGGCATTTTAAGAAATCCATTAATAGATCAGTTAGGGAAAAGCTGCTTAGAGAATTCAGTTGCTCCATCCAGTTATGGTTTCACCAGTG 1016 0.4291 QSNHGAQSVVLSGGYLEDEDHGEWFFYTGSGGRDLHGNKRTAKEQSFDQKFEKYNKALQVSCLKGYPVRVVRIEKCWQKVGLQVCQYLFIRCDNEPAPWTRYEYEAYTVTIFKWKHSDDHGDRPRPLPAISELTNVEKVFERKETPSWDFDEKDFRWKWKKCPPSKKSVKSGDPKDIKRARRHFKKSINRSVREKLLREFSCSIQSSGGRSLRSQKNVMKCPSCIIDIADFLQNIQVNRELMALIESLKA 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01560 250 Pfam SAD/SRA domain 2 105 IPR003105 -
Bva07g01560 250 Gene3D - 75 122 IPR036987 -
Bva07g01560 250 Gene3D - 1 74 IPR036987 -
Bva07g01560 250 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 1 204 IPR045134 -
Bva07g01560 250 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 207 249 IPR045134 -
Bva07g01560 250 SUPERFAMILY PUA domain-like 2 105 IPR015947 -
Bva07g01560 250 SMART G9a_1 1 95 IPR003105 -
Bva07g01560 250 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 207 249 - -
Bva07g01560 250 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 1 204 - -
Bva07g01560 250 ProSiteProfiles YDG domain profile. 1 131 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01560 Bva-Chr7 15165694 15168366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01560 1 249 C2H2 Transcription Factor Family AT5G39550 45.955 7.89e-85 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01560 K10638 - csv:101220457 315.464