Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01552 ATGAGATTTGGGCAATTTCGAAACATAGTGAAGGATGCATTGGAACACGCCGGAATAATAGCAAGGTTCCTTTGTTGTGTCCACGTGACCAGCAACTACCTTTTCTCAACCGTTCATGTGCATGGGGTGAGTATGCTTCCCACCTTGAATCTGTCCGGCGATGTGCTTATCCTCGATCATGTGTCTCCGCGGTTGGGCAAGCTTCAGGTAGGAGATTTGGTGTCGGTTCAATCACCACTGAACCCTAAACGGGTCTTGACCAAGCGCATTTTAGGCATGGAAGGGGACACCGTCACTTACTTTGATCCTTCGCGGGGTGATACAACTCTTACTGCAGTGGTGCCAAAGGGGCATACTTGGATTCAAGGGGATAACGTCTATTACTCATTTGATTCACGTTATTTTGGTCCTGTTCCTTATGGCCTTATACAAGGAAAAGTGATTTACAGGGCTTGGCCAATTGATGGCTTTGGATCTTTGGGTCATTG 488 0.4713 MRFGQFRNIVKDALEHAGIIARFLCCVHVTSNYLFSTVHVHGVSMLPTLNLSGDVLILDHVSPRLGKLQVGDLVSVQSPLNPKRVLTKRILGMEGDTVTYFDPSRGDTTLTAVVPKGHTWIQGDNVYYSFDSRYFGPVPYGLIQGKVIYRAWPIDGFGSLGH 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01552 162 CDD S26_SPase_I 36 147 IPR019533 GO:0004252|GO:0006465
Bva07g01552 162 SUPERFAMILY LexA/Signal peptidase 33 160 IPR036286 -
Bva07g01552 162 ProSitePatterns Signal peptidases I serine active site. 42 49 IPR019756 GO:0004252|GO:0016021
Bva07g01552 162 PRINTS Bacterial leader peptidase 1 (S26A) family signature 86 98 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bva07g01552 162 PRINTS Bacterial leader peptidase 1 (S26A) family signature 114 133 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bva07g01552 162 PRINTS Bacterial leader peptidase 1 (S26A) family signature 33 49 IPR000223 GO:0006508|GO:0008236|GO:0016020
Bva07g01552 162 Gene3D Umud Fragment, subunit A 31 158 - -
Bva07g01552 162 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 4 160 - -
Bva07g01552 162 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 4 160 - -
Bva07g01552 162 Pfam Signal peptidase, peptidase S26 109 152 IPR019533 GO:0004252|GO:0006465
Bva07g01552 162 Pfam Signal peptidase, peptidase S26 17 101 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01552 Bva-Chr7 15128255 15131051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01552 45 161 MADS-box Gene Family AT1G29960 49.153 9.34e-37 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01552 K09647 - mnt:21403647 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01552 07 15128255 15131051 Bva07g01552 07 15128255 15131051 ECH