Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01478 ATGAAATCGACCAGAGAGAAGGAGAACAACCGATGCATTACTTTGCAAATGCACAACCTCCATCAGCGTCTCCATCATGCATTAAACCTTGGCACCAGATATTTTGATGAGAAGACGAACAAGTGGAGATGGAAGTGCGCTAACATTGAAGTACAGAAACAAGTACTTCGCTCAATAGATGCTTTTCTTGATTCTTTATCTGGAGATGCACAGGCATCGCACCACACTATTGTAAAGGATTCTATCGATGACGTTTTGGGGGCATTGTTATGGATTCTTCAAGGAAAAAATGGGCTCTTGTTATCTATGGCAGCCAATTCGGCAGTCAAGTTGGTTGGTACATTACCCAATTCAGTATGGCAATCTCACATATTCGATCTTATCCATCCTCTATCAACCTTGCTATCTTCGCATCAAACAGAAGTTGCAGTAGCCTGTTCAACTGCTTTGAATTTGGTAATCTCAAATTTGAGTGTTACAAGCGAGAAGGCAGTTTGGGAGGCATTGAATGGAGCAGAATGTGTGCTTTGTATTGTTgggaatataaataattttaacagaGGTGTGAAGAAAATCGAATACTTTGAAGAGGTGGCTTCACTTTTGAGCACAATACTGTGGCGGTGGCCTCCATCTAGATTTCCTGTTTGGAATGATGATAAACTAATAAAGGCTTTAGTAGACATGCATATAAAGACAGATTTTTCTACTAGGCTTGCAGTTTTGAAGTTGTACAAATCTTTAGCTTTATGTGGTACGGTGGCCAAAAGACTAATAGAGGATGGAGAAGTTTTTCTACGAATGGTTGTGCAATCAATGGCCAAATCCCACCCTCATGTCATTCGTTTAGAGGGATTTAGGCTTGCTCAATGTCTATTAGCATCCCAAGAGAATTGTTTGAAAGTGATGGATTTTTGTGGTGAAGCTCTTGTTGAAGCCATAATTTGTGGGATGGGAGAAATGAGACATAATTCTAGAAAACCTGCAAAGATCCGTATTGCCTTGTTAGTGGAAGCATGTCAGTTGGCTTTAGTAACTCGTTGGGCAGGTGAGCATCATATTGCTTTTTGGAAGCAAGGAATTGATACGGTCCTCCTTAATCTTTTGATAGAAGATATTCTAGAACAATCATATGAACATGTATTGTCTTTGGAAGAACAAATATCCTTAGTGAAGGAGGGACTGAAAGCCAACTATCTTCTTAGTGTGAGAGGTTATGTTTGGGACATTCTAGGATGGATTGCAATTCACtgtgaagaaaatttcaacCCTATTAAACATGGAAGTGAGCTACGCATCAACTTACTTATCACATGTGCATGCTTAACTTTTGtggatgaaattgaaaaatggtGCCGAATATGTCAAAAGGATGTTGGTGATAATTTTACAAGTGAACCAGCATCAAGGGCTGTTCTGATGATGATTTATTCTCCATGCAATTACATTGCCTCACAGGCCAGATTCATATTATCTGAAATATTAAAGGGAAAAGGCATTACATACTTGAAAAACTTAATACATACTCTAGATTATGCATCATCCTTAGTAAGCTATGGTTCATTTGATAAGCTTCAGCTTGCCATTAACTTGAATGGGTTGACGTGTTTTTCAAGTTTACCAGAGTATCAAAGATGTATCGCTGAAAGCAAAGGGTTAAAGGTTGTTCTTATTATTGTACAGCGATGCTTAAGCAATGAAATCCATGTAGAAAGGTTCAGCTTTGCTCCGCATTTGCatacaaattttcttggaAGGACTTGTTGCTGGGTCTGCTCAGATGATTGGGAAGGTTCCAATATTCTACTGTTTTATGGTCTCTGGGGCTTAGCTGAAGTAACTCATCAGTGTGGCTCTTTACAAGATAATCCTAGTATATTTACTCAAGAGATAGCATCTATTGAAGCCCAATTAGTTAGCAAGTTTCATGAGATATGTAGTAGCACCACTTTCAGTCCTGGATTGAGATGGTATGCTACCTATATTCTTAgttattttggattttatgGTTTCCCGAATGAACTAGCGCAGAAGATTGGGAAATCTCTTAATGAGAAAGAATATGCTGACATGCAACTCATTGTAGCCAATGGGGATTCTTTGAGTGTTCATGGTGTTCTTCTTGCTGTTCGATGTCCATCACTTCTGCCTCCAGAAGGCTTACCTGttataggaaaaagaaatgatggtTTATCATCAAGAGAGCTAACAAATAAGTATTCCAGAGAGACCATGAGAGAAGTTCGTTTATCCGTTCATGTTGATTATGAAGCATTGGTGAAGTTGTTGGAATATATTTACTTGGGCTGTTTACATGCTGATGAAGAAACTGTTAAGAAGTTGAAAGTACTTGCTAAGCGATGCAATCTACGGCCTCTCTTGCGTACTCTTTATAAGAAAAGTCCAAAGTGGGGCATGTCATTTCCGAGCTTAGATCTTGCTTCATGTCTTGGTTCAGCTGGAAGTTGTTTTTCGGATGTTATGTTGGAAGCTAATACAGATAAACTTATTGGCTGGACCTGCAATATCTGTTCACACTCATTGCCACACTTCCATGCTCACAAAGTTATATTGCAGTCTGGCTGTGATTATTTTCGGGCTTTGTTCCACTCAGGAATGCAGGAAAGTCATTCACAAATCATAAAAGTGGACATTAGCTGGGAAGCAATGGTTATACTAGTACACTGGTTTTATTCCAATGAGCTACCAAATCCTCCCTCTGGGTGTTTGTGGGATAATATGGATAATGAAAAAAAGCTATCCAAGCTACAAGCATATGTGGAACTGTGTTGGCTTGCTGAGTTCTGGGTCTGGGAAAATATTCAGGAACCCTGCTGGAATGTGATTATGTCATGTCTTGATTCTGCCAAGCATTTGTCcgtcaaaattatcaaaattgcTGCTAATTACTCTTTATGGAAGTTGGTTGATGTTGCAGCAAATTATTTGGCTCCTTCATATTGTCAACTACGTGATTCTGGTGAACTTGAAGAATTAGATGATATGCTAGTTCACTTAATTTATTCTGCTTCTCTTCGACTTGCCAAGAAGGCCGAAATTGCTTTTAGATG 3071 0.3771 MKSTREKENNRCITLQMHNLHQRLHHALNLGTRYFDEKTNKWRWKCANIEVQKQVLRSIDAFLDSLSGDAQASHHTIVKDSIDDVLGALLWILQGKNGLLLSMAANSAVKLVGTLPNSVWQSHIFDLIHPLSTLLSSHQTEVAVACSTALNLVISNLSVTSEKAVWEALNGAECVLCIVGNINNFNRGVKKIEYFEEVASLLSTILWRWPPSRFPVWNDDKLIKALVDMHIKTDFSTRLAVLKLYKSLALCGTVAKRLIEDGEVFLRMVVQSMAKSHPHVIRLEGFRLAQCLLASQENCLKVMDFCGEALVEAIICGMGEMRHNSRKPAKIRIALLVEACQLALVTRWAGEHHIAFWKQGIDTVLLNLLIEDILEQSYEHVLSLEEQISLVKEGLKANYLLSVRGYVWDILGWIAIHCEENFNPIKHGSELRINLLITCACLTFVDEIEKWCRICQKDVGDNFTSEPASRAVLMMIYSPCNYIASQARFILSEILKGKGITYLKNLIHTLDYASSLVSYGSFDKLQLAINLNGLTCFSSLPEYQRCIAESKGLKVVLIIVQRCLSNEIHVERFSFAPHLHTNFLGRTCCWVCSDDWEGSNILLFYGLWGLAEVTHQCGSLQDNPSIFTQEIASIEAQLVSKFHEICSSTTFSPGLRWYATYILSYFGFYGFPNELAQKIGKSLNEKEYADMQLIVANGDSLSVHGVLLAVRCPSLLPPEGLPVIGKRNDGLSSRELTNKYSRETMREVRLSVHVDYEALVKLLEYIYLGCLHADEETVKKLKVLAKRCNLRPLLRTLYKKSPKWGMSFPSLDLASCLGSAGSCFSDVMLEANTDKLIGWTCNICSHSLPHFHAHKVILQSGCDYFRALFHSGMQESHSQIIKVDISWEAMVILVHWFYSNELPNPPSGCLWDNMDNEKKLSKLQAYVELCWLAEFWVWENIQEPCWNVIMSCLDSAKHLSVKIIKIAANYSLWKLVDVAANYLAPSYCQLRDSGELEELDDMLVHLIYSASLRLAKKAEIAFR 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01478 1023 CDD BTB_POZ_ZBTB_KLHL-like 850 902 - -
Bva07g01478 1023 Gene3D Potassium Channel Kv1.1; Chain A 819 993 IPR011333 -
Bva07g01478 1023 SMART BTB_4 838 953 IPR000210 GO:0005515
Bva07g01478 1023 SMART BTB_4 689 805 IPR000210 GO:0005515
Bva07g01478 1023 SUPERFAMILY ARM repeat 45 449 IPR016024 -
Bva07g01478 1023 SUPERFAMILY POZ domain 668 796 IPR011333 -
Bva07g01478 1023 CDD BTB_POZ_ZBTB_KLHL-like 688 788 - -
Bva07g01478 1023 Gene3D Potassium Channel Kv1.1; Chain A 671 800 IPR011333 -
Bva07g01478 1023 ProSiteProfiles BTB domain profile. 825 906 IPR000210 GO:0005515
Bva07g01478 1023 SUPERFAMILY POZ domain 823 951 IPR011333 -
Bva07g01478 1023 Pfam BTB/POZ domain 850 910 IPR000210 GO:0005515
Bva07g01478 1023 PANTHER OS06G0674800 PROTEIN 1 1017 IPR044953 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Bva07g01478 BTB 1.2e-09 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01478 - - gsj:114385670 1437.94