Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01460 ATgcctctctctccctcttcaATGGCTTCCATTCCTCAATTCTATTCAAGCTACACATTCCCTGCTGATTTCACAGAGTTTCCCACTTCTGGGATTGCTGCAGCCAATGGCAATATTTCATTTCTAGAGAACACAATGAGGAATCAAGACCACAACTTCATTCCTATGCTTGATAATGGCGCACTTGATCATATTGCTTCGTTGGATTGCGATACCATGTCGTCGGCGTGGTTGCCGACCTTCTCGGAGCATCTTGGGAACTTCTCAGACTTGGCCGTGCCGGCAATTTCAGATTGTAAAATGGGTTTATTTGGTGGTGGCGGCGCCATTGCCGGGTTTCAGAATTTCAGCACAGGATATCTGCCTCGTATTGGGGAGTTTGGAGAAGAATGTTGTGGGCTTATGGAGGATGTTAAGGCACCACCTTATACTAATACCGCAAGAGAAAATTGGGGGATTCAAGGTAATCAAATTACAGCAGTTGAAGAACCAAATCTTAAGGTTGGAAGGTATTCAGaggaagaaaggaaggaaagaatTCTCCgatatttgaagaaaagaaatctaaggAATTTCAACAAGACTATCAAGTATGCATGTCGGAAAACCCTAGCTGATCGGCGAGTCAGAGTCAGGGGCAGGTTTGCAAGAAATAATGAGCTGTGTGAGGATGAAACAgcaatgaaaaagaatgagaatcTTCACAAAGAGGACTTGGATTGCGGTGAATCTATCCAATACCAGttaattaataatgatgaGGATTGGCTGCAAGAAGCTATGGCAAGTCTTGTGTATTTATCTCATTCTTCACCAGATGATAATTG 827 0.3857 MPLSPSSMASIPQFYSSYTFPADFTEFPTSGIAAANGNISFLENTMRNQDHNFIPMLDNGALDHIASLDCDTMSSAWLPTFSEHLGNFSDLAVPAISDCKMGLFGGGGAIAGFQNFSTGYLPRIGEFGEECCGLMEDVKAPPYTNTARENWGIQGNQITAVEEPNLKVGRYSEEERKERILRYLKKRNLRNFNKTIKYACRKTLADRRVRVRGRFARNNELCEDETAMKKNENLHKEDLDCGESIQYQLINNDEDWLQEAMASLVYLSHSSPDDN 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01460 275 Pfam CCT motif 176 218 IPR010402 GO:0005515
Bva07g01460 275 PANTHER ACTIVATOR OF SPOMIN::LUC2 8 270 - -
Bva07g01460 275 ProSiteProfiles CCT domain profile. 176 218 IPR010402 GO:0005515
Bva07g01460 275 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 8 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01460 Bva-Chr7 14625423 14627030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01460 172 224 C2C2-CO-like Transcription Factor Family AT5G15850 45.283 2.52e-10 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva07g01460 CCT 1.2e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01460 - - vra:106761508 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01460 07 14625423 14627030 Bva07g01460 07 14625423 14627030 ECH