Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01445 ATGGGAAGACAACCTTGCTGTGATAAGAGCCAAGTGAAGAGAGGCCCTTGGAGCTCTTCAGAGGATCTAAAACTCGTAACTTTCATTCAGAGATATGGCCATGATAACTGGAGAGCTCTCCCCAAACAAGCTGGGCTTCAGCGATGTGGGAAAAGTTGTCGTTTGAGATGGATCAATTACCTCAGGCCTGACGTGAAGAGAGGGAACTttacagaagaagaagaggacaCCATCATGAGACTGCATGGTACCTTCGGAAACAAGTGGGCAAAGATTGCATCGCATTTACCCGGTAGGACAGATAATGAGATAAAGAATGTTTGGCACACTTGtctgaagaaaaaattgctACCTAAAACTACCTCAGGTTCAAGTGCTGAGGAGTCAAATCAAGAATCAACAATAACTTCCCCTAcagcttcatcatcatcagttTCCAATGGGACACCAAACACTGCCAACAGCATAAGTGCTTCTGAATCCACTGAACAGGAAGGCCAAACAGCAATAAAGCCACAGTCACCAATGCAGGTTGAACCAGAAAAGCCAGTGTCCATGGGAATCGATGTTGGAATCACTGAGGCAATGAAAGAGTCATCAACTTCAATTCTTGCTCAGAATCCATTAAATAGTTCTAACCCATCAAGTGAGCTCAATGTTTACAGACCTGAAGAGCCTTCTCTGCTGGATTACATGGGGCCCTATGATGTAAACAATACATTGGCGGAGGTGGAAAGGCCAGAGGGTGAGCTTCACATACCCTCGCAGCTGGCTGATGATGACTTCTGGAGCTTCATGGATAGCATAGAATCCTTCAAGTCTAATAATTACTCAATCGAAAGCTCAAACCTCGGAGGAGATCACAGTGCTGAAGGAGCTGACAATAATAATTGGGCTGATTTCCTTTTGACTGAACTTGGATTAGAGGGTGCCAAGGAGCAAAACCAGGGCCACTTCTTACCAAAAGAGGAATTAGCTCAGCCAGCGATGGATTCTAAACCAGTTCAGTTTGAGACAACGGCAAAGCCAGAAGGTGATGGAAACATGTTTTTTATTCCAACatcgccattttggtcttggCCTCACAACTCTGGTTTTTTTTTAGGTGAAGAGTA 1115 0.417 MGRQPCCDKSQVKRGPWSSSEDLKLVTFIQRYGHDNWRALPKQAGLQRCGKSCRLRWINYLRPDVKRGNFTEEEEDTIMRLHGTFGNKWAKIASHLPGRTDNEIKNVWHTCLKKKLLPKTTSGSSAEESNQESTITSPTASSSSVSNGTPNTANSISASESTEQEGQTAIKPQSPMQVEPEKPVSMGIDVGITEAMKESSTSILAQNPLNSSNPSSELNVYRPEEPSLLDYMGPYDVNNTLAEVERPEGELHIPSQLADDDFWSFMDSIESFKSNNYSIESSNLGGDHSAEGADNNNWADFLLTELGLEGAKEQNQGHFLPKEELAQPAMDSKPVQFETTAKPEGDGNMFFIPTSPFWSWPHNSGFFLGEE 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01445 371 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bva07g01445 371 CDD SANT 69 110 IPR001005 -
Bva07g01445 371 MobiDBLite consensus disorder prediction 118 182 - -
Bva07g01445 371 CDD SANT 16 61 IPR001005 -
Bva07g01445 371 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Bva07g01445 371 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bva07g01445 371 PANTHER MYB-RELATED PROTEIN 2 277 - -
Bva07g01445 371 Gene3D - 14 66 - -
Bva07g01445 371 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bva07g01445 371 MobiDBLite consensus disorder prediction 199 220 - -
Bva07g01445 371 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bva07g01445 371 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 277 - -
Bva07g01445 371 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bva07g01445 371 Gene3D - 68 141 - -
Bva07g01445 371 SMART sant 13 63 IPR001005 -
Bva07g01445 371 SMART sant 66 114 IPR001005 -
Bva07g01445 371 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Bva07g01445 371 MobiDBLite consensus disorder prediction 118 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01445 Bva-Chr7 14544076 14546650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01445 2 316 MYB Transcription Factor Family AT1G79180 39.601 2.90e-64 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva07g01445 Myb_DNA-binding 1.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01445 K09422 - gmx:100101836 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01445 07 14544076 14546650 Bva07g01445 07 14544076 14546650 ECH