Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01434 ATGCTTCGCTTTATAGTCACTGCTTCAAATCGTTTTCCGTCATTTCGCTATGCCCGAGTTGTCAAAACTTGGCAAGGCTTCACTTCTGCCGCCTGCTCGACCAAATGTCCAGCTGAAGCTAAAGGGGGAGAGGAGGAACTGCTTCAGTCTAAACTGTCCCTGCTGACTGGCTTGGGCGTTGATGCACATGACCTTGTGAAGATCATCAATTGTCGGCCCAAATTTCTTGGCAGTCGGATTAACCATCATTTTGATGAGAAGATTGcatattttttgtcattctttGGTTCAAAGAAAACGCTTCTTAATGCCATTGTCAGAAACCCTTCACTGTTACTGTATGATTTTCATTACGTGATTAAACCTTCCATTGCAATCTATGAAGAAATGGGCTTTAAGAAAATGGACTTGATTACTATGATCCTTTATCGGGCCACAATCATTTCAAGAACTTCATTTAACGACGAGAAGCTGGAGTACATACACAGGACAGGGGTTTCCAAGGATtcaaatatgtataaatatgtACACTA 533 0.3996 MLRFIVTASNRFPSFRYARVVKTWQGFTSAACSTKCPAEAKGGEEELLQSKLSLLTGLGVDAHDLVKIINCRPKFLGSRINHHFDEKIAYFLSFFGSKKTLLNAIVRNPSLLLYDFHYVIKPSIAIYEEMGFKKMDLITMILYRATIISRTSFNDEKLEYIHRTGVSKDSNMYKYVH 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01434 177 Pfam mTERF 50 169 IPR003690 GO:0003690|GO:0006355
Bva07g01434 177 Gene3D Transcription termination factor 3, mitochondrial 29 172 IPR038538 -
Bva07g01434 177 SMART mt_12 102 133 IPR003690 GO:0003690|GO:0006355
Bva07g01434 177 SMART mt_12 66 98 IPR003690 GO:0003690|GO:0006355
Bva07g01434 177 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 41 176 - -
Bva07g01434 177 PANTHER CGI-12 PROTEIN-RELATED 41 176 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva07g01434 mTERF 6.7e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01434 K15032 - rcu:8272589 179.104