Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01423 ATGGATCAGTCTGAGCAGAcgcaacagcagcagcaacatgTTGTTGGAGTTGCAGCAGGCTCTAGCCAAATGCCCTATTCCACTCACTACCAGACCACTCCCATGGTGGCTTCTGGCACACCTGCTGTGGCTGTACCTTCGCCGACACAGCCCGCAGCACCCTTCTCCAATTCCCCTCACCAGCTCGCATACCAACAAGCACAGCATTTCCACCaccaacagcagcagcagcaacaacaacagctTCAGATGTTCTGGGCAAATCAAATGCAAGAAATCGAGCAAACTACCGACTTCAAGAACCACAGTCTTCCCCTCGCCCGGatcaaaaaaatcatgaaagcCGACGAAGATGTCCGGATGATCTCAGCAGAGGCTCCGGTCATATTCGCCAAGGCATGTGAAATGTTCATCTTGGAGCTGACTCTGCGATCGTGGATCCACACGGAAGAGAACAAGAGGAGAACACTGCAGAAGAATGACATAGCAGCTGCCATTTCAAGAACTGATGTGTTTGATTTCTTGGTTGATATTATTCCAAGAGATGAATTGAAAGAAGAGGGGCTTGGAATAACGAAGGCTTCAATTCCTGTGGTGGGTTCTCCAGCTGATATTCCATATTACTATGTCTCCCCGCAACATCCTGTTGGACCAACTGGGATGATCATGGGCAAGCCAGTTGACCAAGCAGCACTTTATGCCACCCAGCAGCCACGGCCTCCAATGGCTTTCATGCCATGGCCACAGGGACAACCTCAGCAACCTCAACAGCATCAGACGGACTCTTG 788 0.4632 MDQSEQTQQQQQHVVGVAAGSSQMPYSTHYQTTPMVASGTPAVAVPSPTQPAAPFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYVSPQHPVGPTGMIMGKPVDQAALYATQQPRPPMAFMPWPQGQPQQPQQHQTDS 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01423 262 Gene3D Histone, subunit A 64 181 IPR009072 GO:0046982
Bva07g01423 262 SUPERFAMILY Histone-fold 59 175 IPR009072 GO:0046982
Bva07g01423 262 MobiDBLite consensus disorder prediction 238 262 - -
Bva07g01423 262 Pfam Core histone H2A/H2B/H3/H4 58 166 IPR007125 GO:0003677
Bva07g01423 262 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 257 - -
Bva07g01423 262 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 7 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01423 Bva-Chr7 14459761 14461831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01423 82 213 CCAAT-HAP5 Transcription Factor Family AT1G56170 90.226 6.71e-84 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bva07g01423 Histone 2.9e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01423 K08066 - jre:109011255 375.941