Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01419 ATGGACCAGGAAACCTTGGTAGACGAAAATTTCCCACTCTTTCTCAAACCTCGTAAACCCGCCAAAAATCCCGCTCCTCCCGTCACCGCCGTCGACACCGCCAACCCTAATTCGCACACTGTTCAGCTTGAAAAACCGGGAGCTATGAATAGTGATCCCACCGCCGCCACAACATTCGAGGAACTTGGACTCGCCGAATGGGCGGTGAAGACTTGCAAGGAGCTGAGAATGCGCAAGCCCCGGCGGGTCCAGTCGCACTGTATCCCCAGGATTCTCGAGGGTCGCCATGTGCTTGGCATTGATGAGACTGGTAGTGGCAAGACTGCAGCTTTTGCTTTGCCGATTCTTCAACGTCTAAGTGAGCATCCCTATGGGGTTTTTGCTTTGGTTTTGACGCCGACTAGGGAGTTGGCGTATCAGTTGGCGGAGCAATTTAGGGCACTTGGGTCGTGCTTGCATTTGCGTTTAACTGTGGTGGTTGGAGGTATGGACATGCTGAAACAGGCCAAGAGTTTGATGTCTAGACCACATATTGTGATTGCCACGCCAGGGAGGATCAAGGTTTTGCTTGAGGAGAATCCTGATATACCTCCTGTTTTCTCTAGGATTAAGTTCCTTGTTTTGGATGAAGCAGATCGACTTCTGGATGTTGGTTTCCAGGAAGAATTGAAATTCCTCTTCCAGTGTTTACCAGAAAATCGAcaaaatttgttcttttctgcAACAACAACAAGTAATCTGCAAAAGTTGCATGAACGTTACCAAGATAAGCTGTATGTTTACGAGGCATATGAAGGATTTAAGACAGTTGAAACTCTTCAGCAACAGATGATATTCATCCCCAAAAAGGTGAAGGAGGTCTATTTAACACACGTCttgactaaaatggatgataTGAGCGTTCGCTCCACCATTATATTTGTCAACACCTGCAGAGATTGTCATCGTTTGAGTTTAATGCTGGATGTGATTGAAGTAGAAGCTGCTTCTCTGTATTCATTTAAATCACAGAGTGAGAGGCTTAAGGcacttcatgaatttaaaGCAGGAAAGGTTTCTATACTGCTTGCAACTGATGTTGCCAGCCGTGGTTTGGATATTCCAACAGTTGACCTTGTTATCAATTATGATGTTCCAAGGTTTCCAAGAGATTATGTTCATCGAGTAGGTCGTACTGCAAGAGCAGGTAGGGGAGGGCTGGCATTAAGCATCGTCACCCAGAATGATATTGAACTTATTCATGAAATTGAAGCTCTTCTTGAAAGGCAACTTGAAATGATTGAATACAAAGAGACTGAGGTGCTATCTCTGATTAAAAAGGCATTCAGTGCTAAAAACGTTGCAGAAATGAAGATGATGGATGACGGGTttgaggagaaagaaaaagaaaggaaaaaacagaAACTGGAAATGCTAGAAGCAAAAGGGTTGTTAAAGAAAAGGAgtaaaaagaggaaaagaaatagagactCGGAGAAGAAGGAAGCATA 1490 0.4174 MDQETLVDENFPLFLKPRKPAKNPAPPVTAVDTANPNSHTVQLEKPGAMNSDPTAATTFEELGLAEWAVKTCKELRMRKPRRVQSHCIPRILEGRHVLGIDETGSGKTAAFALPILQRLSEHPYGVFALVLTPTRELAYQLAEQFRALGSCLHLRLTVVVGGMDMLKQAKSLMSRPHIVIATPGRIKVLLEENPDIPPVFSRIKFLVLDEADRLLDVGFQEELKFLFQCLPENRQNLFFSATTTSNLQKLHERYQDKLYVYEAYEGFKTVETLQQQMIFIPKKVKEVYLTHVLTKMDDMSVRSTIIFVNTCRDCHRLSLMLDVIEVEAASLYSFKSQSERLKALHEFKAGKVSILLATDVASRGLDIPTVDLVINYDVPRFPRDYVHRVGRTARAGRGGLALSIVTQNDIELIHEIEALLERQLEMIEYKETEVLSLIKKAFSAKNVAEMKMMDDGFEEKEKERKKQKLEMLEAKGLLKKRSKKRKRNRDSEKKEA 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01419 496 Gene3D - 268 496 IPR027417 -
Bva07g01419 496 SMART ultradead3 76 276 IPR014001 -
Bva07g01419 496 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 288 435 IPR001650 -
Bva07g01419 496 PANTHER ATP-DEPENDENT RNA HELICASE DDX49-RELATED 56 488 - -
Bva07g01419 496 Pfam Helicase conserved C-terminal domain 300 396 IPR001650 -
Bva07g01419 496 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 57 85 IPR014014 GO:0003724
Bva07g01419 496 CDD DEADc_DDX49 59 262 - -
Bva07g01419 496 PANTHER RNA HELICASE 56 488 - -
Bva07g01419 496 MobiDBLite consensus disorder prediction 454 496 - -
Bva07g01419 496 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 125 416 IPR027417 -
Bva07g01419 496 CDD SF2_C_DEAD 273 405 - -
Bva07g01419 496 Pfam DEAD/DEAH box helicase 82 250 IPR011545 GO:0003676|GO:0005524
Bva07g01419 496 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 207 215 IPR000629 -
Bva07g01419 496 MobiDBLite consensus disorder prediction 454 477 - -
Bva07g01419 496 Gene3D - 30 261 IPR027417 -
Bva07g01419 496 SMART helicmild6 315 396 IPR001650 -
Bva07g01419 496 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 88 261 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01419 Bva-Chr7 14450407 14454399 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01419 57 425 Eukaryotic Initiation Factors Gene Family AT3G19760 29.730 3.96e-55 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01419 K14778 - gmx:100804060 707.983