Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01394 ATGGGCCACCGGTGCTGCAGCAAACAGAAGATCAAAAGGGGGCTTTGGTCCCCAGAAGAAGATGAGAAGCTCATCACACACATCACCACCCATGGTCATAAAAGCTGGAGTTCTGTCCCGAAACTTGCAGgcacttctctctctctctcttGGCTGCAGAGGTGTGGGAAGAGTTGCAGATTGAGATGGATAAACTATTTGAGACCAGACCTCAAGAGGGGATCGTTCACTGCAGAAGAAGAGCAGACCATAATCGATGTTCATAGAATTCTGGGTAACAGatGGGCCCAAATAGCCAAGCATCTCCCAGGAAGGACAGACAACGAGGTTAAGAATTTCTGGAACTCCTGCATTAAGAAGAAGCTCATCTCTCAAGGGTTAGACCCACAAACTCACACTCTACTGTCTTCTCACAGGAGAGCCTCTGCATGCAGTAACATCTCAGAAATCAATCCAAATACCAGTTCCATTTTCACTCTGAATTCACAGCTGATTCCAAATGCTGGCATGATTCCTTATAATAAAGCTCAACCAGACATAGTTCAAACTAATTCCACCATTTTTTCCTCTGAATATCAACCCTCTAGCATTATCTCCAATAATGTTCAAGCTCATGATTCTCCTAATTTCTCAGATTTCCCTTATGTACCATCATTTGGGAACACACAcaatttttgttcttcttcctGCTGCATGAACCCTTGTGCTGTTGGATTCTCAGAAAATGAGAATAACATATGGGTTTCTAGTGCTGAAAACTTCAGAGCTCAAGGATTTGAAGGATTACAAGCACAAGTAGAGCAAGCAAAGGAGAATAAGCCTTCTGAGAATGGAATTGATGATGCCAGAGAATTAGCAAAGGGCAACCCTGAAATGAATAATGCTTCTTTTGAGAGTGCTAACTTTGATTTTGGGTTACTAGAGAGTGTAATTGCTAGTGAATTCATGTCTCGTGATCTCAGTTCTATGGATGAACTTGCATGGAACTTTTA 992 0.4073 MGHRCCSKQKIKRGLWSPEEDEKLITHITTHGHKSWSSVPKLAGTSLSLSWLQRCGKSCRLRWINYLRPDLKRGSFTAEEEQTIIDVHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLISQGLDPQTHTLLSSHRRASACSNISEINPNTSSIFTLNSQLIPNAGMIPYNKAQPDIVQTNSTIFSSEYQPSSIISNNVQAHDSPNFSDFPYVPSFGNTHNFCSSSCCMNPCAVGFSENENNIWVSSAENFRAQGFEGLQAQVEQAKENKPSENGIDDARELAKGNPEMNNASFESANFDFGLLESVIASEFMSRDLSSMDELAWNF 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01394 330 SMART sant 72 120 IPR001005 -
Bva07g01394 330 SMART sant 12 69 IPR001005 -
Bva07g01394 330 Pfam Myb-like DNA-binding domain 13 67 IPR001005 -
Bva07g01394 330 Pfam Myb-like DNA-binding domain 73 116 IPR001005 -
Bva07g01394 330 SUPERFAMILY Homeodomain-like 10 114 IPR009057 -
Bva07g01394 330 CDD SANT 75 115 IPR001005 -
Bva07g01394 330 PANTHER MYB DOMAIN PROTEIN 55 1 318 - -
Bva07g01394 330 Gene3D - 10 73 - -
Bva07g01394 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 67 IPR017930 -
Bva07g01394 330 CDD SANT 16 67 IPR001005 -
Bva07g01394 330 ProSiteProfiles Myb-like domain profile. 68 118 IPR001005 -
Bva07g01394 330 PANTHER BNAC05G40480D PROTEIN 1 318 - -
Bva07g01394 330 Gene3D - 74 144 - -
Bva07g01394 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 122 IPR017930 -
Bva07g01394 330 ProSiteProfiles Myb-like domain profile. 8 67 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01394 Bva-Chr7 14299931 14301191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01394 1 174 MYB Transcription Factor Family AT3G12720 61.951 2.51e-84 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva07g01394 Myb_DNA-binding 6.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01394 K09422 - gmx:100791209 384.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01394 07 14299931 14301191 Bva07g01394 07 14299931 14301191 ECH