Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01393 ATGGCTCCAATGAGTCTCCCACCTGGTTTTAGGTTCCATCCAACAGATGAAGAGCTTGTAGCATACTActtagaaagaaagataacagGAAGAACAATAGAGCTTGAAATCATCCCAGAAGTTGATCTGTACAAATGTGAACCTTGGGATTTGCCTGATAAATCATTTTTGCCAAGCAAAGATATGGAGTGGTACTTCTACAGTCCAAGAGATAGAAAGTATCCAAATGGGTCAAGAACTAACAGGGCAACAAGAGCTGGTTATTGGAAAGCAACTGGGAAAGATAGACCGGTGCACTCTCAAAAGCGGCCGGTTGGCATGAAGAAGACATTGGTTTATTACAGAGGAAGAGCCCCGCATGGGATTAGAACCAACTGGGTCATGCATGAGTATCGTCTAATCGAATCGGTGCCTGGTACTGCTTCTTCATCTttaaagGATTCTTATTCCTTGTGTCGCGTTTTCAAGAAGACCATACAAATCCCCAAACctaaagagaaagaacaaacTGAGAATAATAACAAGGAATCTATGTGGGCCTCAGAAGAACAAGTACAAGGAGAAgattcaagtgggattgagaGAGAAAtccaaatgaaaaatgagaaagtacAAAATCATCATGATCCTCCTAAATTTGCATGTGATGCTTCTTCTTCAGATATCACTCAAGGAACACCCCCTGAAACTGGCAATGCAGATGATTTTCAAGTACAATTTGTTTCGGATGAAGCAAATAGCGCTTCAAATTCATATTCTCTTGGTCTTGACTACTCCTCAAATCTATTTCAGGATATGGAGTTACCATTCTGTGGAGGCTTGCATTATCAACTTCCATATCCTCCTCCTTTGGAGCTGGAAGATTTCCCTCAAATAAACTTATCAGAGGCAAAGTGGATGAAGTCTGAAATGACTGAGGAATGCATGGTGTATGGCAAATACAGGGGCTGCATGAATGAAACACTAGAAGAGATCTTCTCTTTGTGCTCCTCTCAGGATAACTCAGCGGCATTATCCATGCTAGATGGAGTACACTA 1037 0.3848 MAPMSLPPGFRFHPTDEELVAYYLERKITGRTIELEIIPEVDLYKCEPWDLPDKSFLPSKDMEWYFYSPRDRKYPNGSRTNRATRAGYWKATGKDRPVHSQKRPVGMKKTLVYYRGRAPHGIRTNWVMHEYRLIESVPGTASSSLKDSYSLCRVFKKTIQIPKPKEKEQTENNNKESMWASEEQVQGEDSSGIEREIQMKNEKVQNHHDPPKFACDASSSDITQGTPPETGNADDFQVQFVSDEANSASNSYSLGLDYSSNLFQDMELPFCGGLHYQLPYPPPLELEDFPQINLSEAKWMKSEMTEECMVYGKYRGCMNETLEEIFSLCSSQDNSAALSMLDGVH 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01393 345 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Bva07g01393 345 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 302 - -
Bva07g01393 345 MobiDBLite consensus disorder prediction 163 234 - -
Bva07g01393 345 MobiDBLite consensus disorder prediction 217 234 - -
Bva07g01393 345 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 302 - -
Bva07g01393 345 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Bva07g01393 345 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Bva07g01393 345 MobiDBLite consensus disorder prediction 188 210 - -
Bva07g01393 345 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01393 Bva-Chr7 14292071 14295363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01393 1 327 NAC Transcription Factor Family AT1G54330 56.928 1.22e-111 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva07g01393 NAM 1.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01393 - - gmx:100790679 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01393 07 14292071 14295363 Bva07g01393 07 14292071 14295363 ECH