Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01379 ATGGCGTCAAAGCCTGTCAAGAGGCATTACTTACCTGAGCAACAAATTCACCAAATCGTCCCCCAACTCACAATTCATCAAGTGAAAACTGGACAAATGGATTACATTTGGAAAACTGATTCAAAGTTGTCAAGTGATACAGCATCAGAATATAAGAAATCAGAGCTATCTAGCAAGCCTACTGACTTACCCACTAGTCAACGGTCAAGTCCAGGTGCAAGGGTGCCTATGAGTCCTGAACCCACAACTACCTCGTCTGGGGCTCCATGGGGTTTGTCTACACAAACGAGGAACACACATCATGGCTATGGGAGTGGAACTAGCTCTCGTAGTGACAGTTTAGAGAGCACCAGTGCACCCATTAAGCCACATACTGGTGGTGATGTAAGGTGGGACGCTATTAATTCAGTTTCCAGGGGCACCCCTCTTAATCTTTCCCATTTTCGGCTTCTCAAGCGTCTTGGATATGGAGATATTGGAAGTGTATATCTTGTGGAACTTAAAGGAACTAGGGCATACTTTGCCATGAAAGTAATGGACAAGGCATCTCTTGCAAGCAGAAATAAGCTACTGCGAGCACAAACAGAAAGGGAGATTCTTGGACTTCTTGACCATCCATTCTTACCCACTTTGTATTCTTACTTCGAAACTGACAAGTTCAACTGTTTGGTCATGGAGTTCTGTAGTGGAGGCAATCTTCATTCTCTTCGTCAGAAGCAACCTAACAAGCACTTTTCTGAAGAAGCTGCAAGGTTCTATTGTTCAGAGATTTTGTTAGCTCTTGAATACCTGCACATGCTAGGAATTGTGTACAGAGACTTGAAGCCAGAAAATGTATTGATAAGAGATGAAGGGCATATCATGCTCTCAGATTTTGATTTATCACTCCGCTGTTCTGTCAATCCTACACTTGTCAAGTCATCATCTGCCCATACAAGCAACACCAGCAGCAATGGAGCCATTTTGGATGACGAGAATGCAGCACAAAGTTCTGTCCAGCCATTGACATTTTTTCCTCGGATTTTACCTTCAAAAAAGAACCGTAAATCAAAATCAGACTTTGGCCTCTTGGTTGGAGGAGGTCCAGGTCCCCTTCCTGAGCTGATGGCAGAACCCACAAACGTGCGGTCAATGTCATTTGTAGGCACACATGAATACCTTGCTCCAGAGATAGTCCGAGGAGAGGGACATGGCAGTGCGGTAGATTGGTGGACCTTTGGCATCTTCTTGTATGAGCTGTTGCATGGGATGACACCGTTTAAGGGTGCAGGAAACCGAGCCACCCTTTTTAATGTTGTAGGACAGCCATTAAGGTTTCCAGAAGCTCCCCATGTCAGTGCTGTGTCGCGAGATCTTATAAAAGGATTGTTGGTGAAGGAACCACACAAGAGAATTGCTTATAAGAGAGGTGCAACAGAAATAAAGCAACACCCTTTTTTTGAAGGAGTGAACTGGGCTCTAGTTAGAAGTGCCACACCTCCCATTATACCAGATCCTGTAGATTTTTCACAGTATGCCAGCAAAGATACAACACACCCGGCAGACAAGAAGATGACAGATATTGCAAATGATAAAAACATCAGTAGTCAACCTGATTCTTCTTACGtaaattttgagtattttta 1625 0.4363 MASKPVKRHYLPEQQIHQIVPQLTIHQVKTGQMDYIWKTDSKLSSDTASEYKKSELSSKPTDLPTSQRSSPGARVPMSPEPTTTSSGAPWGLSTQTRNTHHGYGSGTSSRSDSLESTSAPIKPHTGGDVRWDAINSVSRGTPLNLSHFRLLKRLGYGDIGSVYLVELKGTRAYFAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFNCLVMEFCSGGNLHSLRQKQPNKHFSEEAARFYCSEILLALEYLHMLGIVYRDLKPENVLIRDEGHIMLSDFDLSLRCSVNPTLVKSSSAHTSNTSSNGAILDDENAAQSSVQPLTFFPRILPSKKNRKSKSDFGLLVGGGPGPLPELMAEPTNVRSMSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLHGMTPFKGAGNRATLFNVVGQPLRFPEAPHVSAVSRDLIKGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALVRSATPPIIPDPVDFSQYASKDTTHPADKKMTDIANDKNISSQPDSSYVNFEYF 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01379 541 PANTHER SERINE/THREONINE-PROTEIN KINASE AGC1-5 46 541 - -
Bva07g01379 541 Pfam Protein kinase domain 377 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g01379 541 Pfam Protein kinase domain 149 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g01379 541 PANTHER FLIPPASE KINASE 1-RELATED 46 541 - -
Bva07g01379 541 SMART serkin_6 148 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g01379 541 MobiDBLite consensus disorder prediction 58 120 - -
Bva07g01379 541 MobiDBLite consensus disorder prediction 44 125 - -
Bva07g01379 541 Gene3D Phosphorylase Kinase; domain 1 146 227 - -
Bva07g01379 541 Gene3D Transferase(Phosphotransferase) domain 1 376 498 - -
Bva07g01379 541 CDD STKc_phototropin_like 146 501 - -
Bva07g01379 541 Gene3D Transferase(Phosphotransferase) domain 1 228 297 - -
Bva07g01379 541 ProSiteProfiles Protein kinase domain profile. 148 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g01379 541 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
Bva07g01379 541 MobiDBLite consensus disorder prediction 506 526 - -
Bva07g01379 541 ProSiteProfiles AGC-kinase C-terminal domain profile. 481 541 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bva07g01379 541 SUPERFAMILY Protein kinase-like (PK-like) 145 512 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01379 Bva-Chr7 14180241 14182215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01379 56 541 AGC Kinase Gene Family AT1G79250 68.047 0.0 661
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bva07g01379 Pkinase 3.9e-37 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01379 07 14180241 14182215 Bva07g01379 07 14180241 14182215 ECH