Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01378 ATGAATATTGCTTTCCAGAAAAAGCGGCCTCTCTATTTGAGCACTAGAAATACCATTCTAAAGAAATATGATGGAAGATTCAAGGACATTTTCCAGGAAGTTTATGAAAAGCAATGGAGTTTCAAGTTCAAAGTTGCAGGAATATGGTACGAACACCGTCTCATAGATGATATGGTTGCCTTTGTTCTCAAAAGTGAAGGAGGATTTGTGTGGGCATGCAAGAACTATAATGGGGATGTGCAGAGTGATTTCTTAGCTCAAGGTGGACATCAATTGAGAAAGTG 284 0.3873 MNIAFQKKRPLYLSTRNTILKKYDGRFKDIFQEVYEKQWSFKFKVAGIWYEHRLIDDMVAFVLKSEGGFVWACKNYNGDVQSDFLAQGGHQLRK 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01378 94 Pfam Isocitrate/isopropylmalate dehydrogenase 1 87 IPR024084 -
Bva07g01378 94 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 2 88 - -
Bva07g01378 94 PANTHER NADP-SPECIFIC ISOCITRATE DEHYDROGENASE 1 89 IPR004790 GO:0004450|GO:0006102
Bva07g01378 94 Gene3D Isopropylmalate Dehydrogenase 1 91 - -
Bva07g01378 94 PANTHER ISOCITRATE DEHYDROGENASE [NADP] 1 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01378 Bva-Chr7 14179052 14179562 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01378 K00031 - gmx:100816688 164.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01378 07 14179052 14179562 Bva07g01378 07 14179052 14179562 ECH