Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01374 ATGATCCTTCTGTCTCAACAACCCGCACAACCACTCTTCTTCATATCCTCCACCTACAAATCCCACCTTCCCTTCCGCCATCATGTTCGTTTTCCTGTGTGTGCTCCTTTCTCTGAAGCACCACCCATCATGCCTGTTTCTGCAACTAAGCTTCGCAGGAGAAGGAGTCGGAGCATCCCATTTAGATGTTTCTCTTCGGCTGCAACATCACCAGCTCCATTGCCGCCAGACCCAGATAAGCAAGTGAAGGAAGGAAGCGATGATGTGGTGGGACAGAGGAAGGGTCCTGATCTACAAACGCTTCTCAGAATGTTCTGGAAAGTGGCAGCTCCATATTGGTCCTCAGATGATAAGGTTCAAGCAAGACTACAGCTTGCTGGTGTTTTTGCTCTCACTTTAGCTACCACTGGAATCAGTGTCGGTTTCAATTTCCTTGGGAGAGACTTCTATAATGCACTTGCTAATAAGGACCAAGAGCAATTCACGAGGCAACTACTCTACTACTTGGGTGGCTTTGCTACTGGAATCCCGTTTTTTGTATTGAGAGATTATGCTAGAGAAACTCTTTCTTTAAGATGGAGGTCTTGGATGACAAGCTATTATATGGAACGCTATCTTAATAATCGGACCTTCTATAAAATTCAGTCACAATCAATTATTGATAACCCAGACCAGCGAATTGTGGATGATCTAAGTTCTTTCACTGGGACAGCTCTGGCATTCTCTCTGACACTGTTTAATGCGGCAGTGGACTTAATCTCATTCAGCAACATCTTGTATGGCATCTATCCTCCCCTCTTCATTGTTCTTCTGACATACTCGATTGGTGGGACAGCTATCAGTGTTTACCTTGGCAAGGGATTggtgaatttaaatttcttgcaagagaaaaaagaagcagaTTTTCGTTATGGACTTGTAAGAGTTCGAGAAAATGCCgaatcaatttctttctatGGTGGTGAAGAAAGTGAAATGCAACTTCTTGTGCAGCGTTTCAGAAGTGCTTTTGAAAATCTAACACAATTGTTGATCGCTTCTAGAAATCTGGAGTTCTTCACCAATGGCTATCGCTATCTCATTCAAGTTCTTCCAGTTGCTGTCATTGCTCCAATGTATTTCTCAGGAAAAATTGAGTTTGGTGTTATCAATCAGTCTGTCTCTGCTTTTAACCATATCCTTGGTGACTTTTCCCTCATTATCTACCAGTTTCAAGCTATAAGTGCATTTTCTGCTGTTATTAATCGGCTAGGTGAATTTGATGATCTTTTGGACAGCAGCAGCAGTTCTAAATCTATCTCCGATACCTTGGAAGAGATACGTATTACATACAAAAATACTAAGAGTTCATCTATATTGGAATCAAATGGATCCATCGCATCGGCGAAATGTGAAACATTATTGGAGATAGAAAATTTGACTCTGAAGACACCAAGTGAAGCTACGCTTGTTAGAGACTTATCATTGACGATTAAGGAAAAGGATCATTTGCTGATCATGGGACCGAGTGGTAGTGGTAAAACTTCTTTGCTGAGAGCTGTGGCTGGTTTATGGAATACTGGAACTGGAAAAATTACGTATTATGTAAAAGATGGAGAAGCTCCTCAACCATCCGTCTGTTCAGATATGACTATCCCTTCCGTGAATGCTGCTTCTGATGCACGTGAAGAACATGGAAAATCCATAAACAAGAACTGCAGGACATTTTTCCTTCCTCAAAGGCCATATATGGTTTTGGGTACACTTCGTCAACAGTTACTTTATCCAACTTGGGCTGAAGATGCTGTTCCTCCGTCAGAAAGTACAATATCAAAAAGTACTCTGCCTTTCTTGATGAAATCTCCAAACTCAGATAGCAAGAAGGAAAAGCCTAGGAAGCCAACAACAGAAGAGCTGGTCAGTGTTTTAGAGGATGTCCGCCTTGGCTACTTATTGGCTCGATTCAGTTTGGATTCAATACAAGAATGGTCTAGTGTTCTCTCTGTGGGAGAGCAGCAACGCCTTGCTTTTGCTCGTCTTTTGCTCGCAAAACCTGAATTAGTTTTGTTGGATGAGTCTACGAGTGCTCTTGATGAAGCCAATGAGGTTCATTTGTACAAGATGATTGGATCAGCAGGGATGACGTACATAAGTATCGGCCATCGCCCAACCCTGCGCGAATACCACAAAAAGATCTTACACATATCCACAGTTGATTCTAACAGTAACCAGTTAAATTGGAGCATTGAATCCATTAGACACGAATCTACATACGATCTTTCGAAGTA 2267 0.4116 MILLSQQPAQPLFFISSTYKSHLPFRHHVRFPVCAPFSEAPPIMPVSATKLRRRRSRSIPFRCFSSAATSPAPLPPDPDKQVKEGSDDVVGQRKGPDLQTLLRMFWKVAAPYWSSDDKVQARLQLAGVFALTLATTGISVGFNFLGRDFYNALANKDQEQFTRQLLYYLGGFATGIPFFVLRDYARETLSLRWRSWMTSYYMERYLNNRTFYKIQSQSIIDNPDQRIVDDLSSFTGTALAFSLTLFNAAVDLISFSNILYGIYPPLFIVLLTYSIGGTAISVYLGKGLVNLNFLQEKKEADFRYGLVRVRENAESISFYGGEESEMQLLVQRFRSAFENLTQLLIASRNLEFFTNGYRYLIQVLPVAVIAPMYFSGKIEFGVINQSVSAFNHILGDFSLIIYQFQAISAFSAVINRLGEFDDLLDSSSSSKSISDTLEEIRITYKNTKSSSILESNGSIASAKCETLLEIENLTLKTPSEATLVRDLSLTIKEKDHLLIMGPSGSGKTSLLRAVAGLWNTGTGKITYYVKDGEAPQPSVCSDMTIPSVNAASDAREEHGKSINKNCRTFFLPQRPYMVLGTLRQQLLYPTWAEDAVPPSESTISKSTLPFLMKSPNSDSKKEKPRKPTTEELVSVLEDVRLGYLLARFSLDSIQEWSSVLSVGEQQRLAFARLLLAKPELVLLDESTSALDEANEVHLYKMIGSAGMTYISIGHRPTLREYHKKILHISTVDSNSNQLNWSIESIRHESTYDLSK 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01374 755 Pfam ABC transporter transmembrane region 2 117 374 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva07g01374 755 ProSitePatterns ABC transporters family signature. 660 674 IPR017871 GO:0005524
Bva07g01374 755 MobiDBLite consensus disorder prediction 66 93 - -
Bva07g01374 755 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 460 728 IPR027417 -
Bva07g01374 755 SUPERFAMILY ABC transporter transmembrane region 103 420 IPR036640 GO:0005524|GO:0016021
Bva07g01374 755 PANTHER ATP-BINDING CASSETTE SUB-FAMILY D MEMBER 3 83 746 - -
Bva07g01374 755 Gene3D - 459 738 IPR027417 -
Bva07g01374 755 SMART AAA_5 493 732 IPR003593 -
Bva07g01374 755 Gene3D ABC transporter type 1, transmembrane domain 91 423 IPR036640 GO:0005524|GO:0016021
Bva07g01374 755 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 468 755 IPR003439 GO:0005524
Bva07g01374 755 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER 83 746 - -
Bva07g01374 755 MobiDBLite consensus disorder prediction 609 629 - -
Bva07g01374 755 CDD ABCD_peroxisomal_ALDP 468 729 - -
Bva07g01374 755 Pfam ABC transporter 485 688 IPR003439 GO:0005524
Bva07g01374 755 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 126 409 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01374 Bva-Chr7 14161430 14167180 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01374 54 745 Acyl Lipid Metabolism Gene Families AT1G54350 66.141 0.0 896
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01374 - - gmx:102661014 1067.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01374 07 14161430 14167180 Bva07g01374 07 14161430 14167180 ECH