Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01353 ATGGCCTCCGCCACCACCAACACCCCCACGGCGGCGACGGAGGAAGCTGAAATGAAGACGTATTGGTGCCATGAGTGTGATATGAGTGTAGCTTTGACTTCATCTTCAACCTCATCATCTCCTTCTACTCTTCTCTGCCCCCATTGCCACACCCACTTCCTCGAACTCATGGACTCCCCTCTCTTCCCTCAATCCGACACAGACCCACCTCCCTCTTCTCTTTCCCTCTTAGAAACCCCCTATATCCATCGCCTACTCCAACAGCACCTCATTTCTGCCGACGAGTTCAACGACGACGACGATGGCGAGGCCGAAGATGAAGTTGAAGACCCATTACCTTTGCTCTCCTCCCAAAACTCCTTCTGCAGCTCCAAATTTCGCATAGATTCGGTACCCACAATTTTGGTTACTTCTTCCTTGCTAGCGGAGCTCGACCCAAGTGGTGTTCTCTGTGCTGTTTGCAAGGACCCAATTTGCGTCGATGCAGAAGCAAAGCAGCTTCCTTGTAAACATTTATACCACTCTGATTGCATTGTTCCTTGGCTGGCACACCACAATTCGTGCCCTCTTTGTCGGTTTCAGCTGGCCGCGGAGGAAGAGGAAGGGGCTGCTCGGGCAAGGAGGATTAGGAGGCAATTGAGAACGGCCATGATGAGGCTTGCTGAATTGatggaagaagatgatgatttcTATGGATTAAGGACTACTTTGAGTCACATTGCGAATAGGCACGGCCTTGTTTCCTCTGCTACCGTGAATTCATTGTCTTTGTCGTCTTCCCAGATGAATGAAGCTGAGACTATGTCTGCGAGTGGCACTAATAATTTGGAGACTCCTTCGAGCTTTCCTGTTGAAAGAGGGTTACTGGATTCGCTTGTCGGTGAAGATGGACAAGCTCAAGCAGGGTG 908 0.4945 MASATTNTPTAATEEAEMKTYWCHECDMSVALTSSSTSSSPSTLLCPHCHTHFLELMDSPLFPQSDTDPPPSSLSLLETPYIHRLLQQHLISADEFNDDDDGEAEDEVEDPLPLLSSQNSFCSSKFRIDSVPTILVTSSLLAELDPSGVLCAVCKDPICVDAEAKQLPCKHLYHSDCIVPWLAHHNSCPLCRFQLAAEEEEGAARARRIRRQLRTAMMRLAELMEEDDDFYGLRTTLSHIANRHGLVSSATVNSLSLSSSQMNEAETMSASGTNNLETPSSFPVERGLLDSLVGEDGQAQAG 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01353 302 Coils Coil 206 226 - -
Bva07g01353 302 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 19 276 - -
Bva07g01353 302 SMART ring_2 151 191 IPR001841 -
Bva07g01353 302 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 141 207 IPR013083 -
Bva07g01353 302 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RING1-LIKE 19 276 - -
Bva07g01353 302 Pfam Ring finger domain 151 192 IPR001841 -
Bva07g01353 302 Pfam zinc-ribbon 20 57 IPR039525 GO:0061630
Bva07g01353 302 SUPERFAMILY RING/U-box 141 196 - -
Bva07g01353 302 ProSiteProfiles Zinc finger RING-type profile. 151 192 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01353 Bva-Chr7 14047221 14049847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01353 15 274 C3H Transcription Factor Family AT3G60080 37.755 1.53e-35 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01353 K11982 - csin:114267674 205.297