Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01314 ATGGCGCCGGCAAAGCAAAGAACACCCAAGGTCAGCAGAAACCCCGAGCTCATTCGAGGGATTGGGAAGTTCTCCCGATCAAAGATGTACCACAAGAGGGGCATCTGGGCTATCAAGGCCAAAAACGGGGGCAAATTCCCTCACTACGACCACAAACCGACGCCTGAAGCACCAGCTGAGAAACCACCTAAGTTTTACCCAGCTGATGATGTGAAGAAGCCACTTGTCAACAAGCGCAAGCCAAAACCTACAAAGCTCAGGGCTAGCATTACTCCTGGGACTGTTCTGATTCTCCTTGCTGGGAGATTCAAGGGAAAGAGAGTGGTGTTTCTGAAGCAGCTTTCCTCTGGCTTGCTTCTTGTTACTGGTCCTTTCAAGATTAATGGAGTTCCATTGAGAAGGGTCAACCAGTCTTATGTTATTGGTACATCCACCAAGGTTGACATCTCTGGTGTTAATGTGGATAAATTTGATGACAAATACTTCGCAAAGGaagttaagaaaaagaaaaccaagggAGAAGGCGAATTCTTTGAGGCAGAGAAGGAGGAGAAGAACGTGCTCCCACAGGAGAAAAAGGATGACCAAAAATCAGTTGATGCCGCTTTGATTAAGGCTATTGAGAGTGTTCCAGACTTAAAGACATATTTGGGTGCAAGATTCTCGCTCAAGGCTGGCCAGAAGCCTCATGAGCTGGCCTTCTA 704 0.4588 MAPAKQRTPKVSRNPELIRGIGKFSRSKMYHKRGIWAIKAKNGGKFPHYDHKPTPEAPAEKPPKFYPADDVKKPLVNKRKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLSSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDKFDDKYFAKEVKKKKTKGEGEFFEAEKEEKNVLPQEKKDDQKSVDAALIKAIESVPDLKTYLGARFSLKAGQKPHELAF 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01314 234 Gene3D - 88 172 IPR014722 -
Bva07g01314 234 MobiDBLite consensus disorder prediction 44 77 - -
Bva07g01314 234 Pfam Ribosomal protein L6, N-terminal domain 4 62 IPR005568 GO:0003735|GO:0005840|GO:0006412
Bva07g01314 234 SUPERFAMILY Translation proteins SH3-like domain 88 174 IPR008991 -
Bva07g01314 234 MobiDBLite consensus disorder prediction 43 85 - -
Bva07g01314 234 PANTHER 60S RIBOSOMAL PROTEIN L6 1 234 - -
Bva07g01314 234 CDD KOW_RPL6 82 234 IPR041997 -
Bva07g01314 234 Pfam Ribosomal protein L6e 127 234 IPR000915 GO:0003735|GO:0005840|GO:0006412
Bva07g01314 234 PANTHER 60S RIBOSOMAL PROTEIN L6 1 234 IPR000915 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01314 Bva-Chr7 13743589 13745476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01314 3 234 Cytoplasmic Ribosomal Protein Gene Family AT1G74050 82.328 2.47e-125 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01314 K02934 - pvy:116113922 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01314 07 13743589 13745476 Bva07g01314 07 13743589 13745476 ECH