Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01307 ATGGCTCACTGGCAAAACGATTTGGATAATGGAATTGATTACATGTTCAAGGTGGTGATGATCGGAGACCCTTCTGTCGGGAAAACTCAGCTATTGTCTCGCTTTGCAAAAGatgaattcaaaataaattcaagagCCACCATTGGTGTAGAATTCCAGTCCAAGACGGTGGTGATAGACCACAAGACCATCAAGGCTCAGATATGGGACACTGCTGGTCAGGAAAGGTACCAGGCAATAACGAGTGCATACTACAGAGGAGCAACTGGTGCAATGCTAGTTTACGACATAAGCAAGCGAAGAACATTTGATGATGTCGAAAAGTGGCTGAACGAGCTGAGGAGGTACGCAGATAATCATGTAACCATGATgctcattggcaacaagacaGACTTGCAGTCTCTTAGAGAAGTTCCAACTGAAGAAGCCAAAGAGCTTGCCCAAAGAGAGGATTTGTTCTTCATGGAAACATCAGCACTTGACTCCACCAATGTGGACTCAGCTTTTCTTGCTGTGCTCTCACAGATTTATAGGTCTGTGACCCACAGGAATGTCCTGCCTCCATATGAAGATtggaataatataatacttggGAAAGGGATACCAATCAATCCCCAGTTGCCGGAGCgccaagaagaaaatgggtcAAGGCCTAAAAGGATGTTCAATCATTGCTGTAACTTTTA 686 0.3994 MAHWQNDLDNGIDYMFKVVMIGDPSVGKTQLLSRFAKDEFKINSRATIGVEFQSKTVVIDHKTIKAQIWDTAGQERYQAITSAYYRGATGAMLVYDISKRRTFDDVEKWLNELRRYADNHVTMMLIGNKTDLQSLREVPTEEAKELAQREDLFFMETSALDSTNVDSAFLAVLSQIYRSVTHRNVLPPYEDWNNIILGKGIPINPQLPERQEENGSRPKRMFNHCCNF 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01307 228 Pfam Ras family 17 177 IPR001806 GO:0003924|GO:0005525
Bva07g01307 228 ProSiteProfiles small GTPase Rho family profile. 9 186 - -
Bva07g01307 228 ProSiteProfiles small GTPase Rab1 family profile. 11 226 - -
Bva07g01307 228 SMART rho_sub_3 18 175 IPR001806 GO:0003924|GO:0005525
Bva07g01307 228 SMART ras_sub_4 16 179 - -
Bva07g01307 228 Gene3D - 9 187 IPR027417 -
Bva07g01307 228 PRINTS Transforming protein P21 ras signature 119 132 - -
Bva07g01307 228 PRINTS Transforming protein P21 ras signature 16 37 - -
Bva07g01307 228 PRINTS Transforming protein P21 ras signature 57 79 - -
Bva07g01307 228 PRINTS Transforming protein P21 ras signature 39 55 - -
Bva07g01307 228 PRINTS Transforming protein P21 ras signature 154 176 - -
Bva07g01307 228 SMART arf_sub_2 1 181 - -
Bva07g01307 228 CDD Rab11_like 13 177 - -
Bva07g01307 228 ProSiteProfiles small GTPase Ras family profile. 10 228 IPR001806 GO:0003924|GO:0005525
Bva07g01307 228 SMART rab_sub_5 16 179 - -
Bva07g01307 228 PANTHER RAB GTPASE-LIKE PROTEIN G3A 1 212 - -
Bva07g01307 228 SMART ran_sub_2 21 215 - -
Bva07g01307 228 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 192 IPR027417 -
Bva07g01307 228 TIGRFAM small_GTP: small GTP-binding protein domain 14 170 IPR005225 GO:0005525
Bva07g01307 228 PANTHER - 1 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01307 Bva-Chr7 13709407 13710836 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01307 K07904 - rcu:8261119 276.174