Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01305 ATGAGTGTTCTGTATAGTCCTACTCCCAAGTATTCAGATGGGGAGCTAAAGAGAAACCCAGAAATGGGTTCAAGCATTGGCCACCCTCAACAATGTCACCAACCCAATTCTGGGCTACTCCGGTACCGTTCTGCGCCAAGTTCATTTTTTGCAAACCTTGTGGATAATAGCAACCATGGCTGTTTGAATGAGGGAGCTTATGGTCACAGTAACTACGTTTCTTCATCAAGTGCTGAAATGGAAACCATGTTGGCTAAGCTTATTTCTTCTAACAATGGATGGGGCAATTCTGCGTCTTTGAATGAGCATGGAGAGAAGCCTGTGAAGCAAGAAGCAGGGGAATCTGTTCCACCACACAACTGTTACCCTTATGCTTCTCAGATGATTTACCAGAATCAGCAAGTTCAAGGCTTTCCCAGTGCTAATTTGAGTGGTGGAAATGCTTTTGATGCCTCATTTGGTGTTTCAGAGAACTCCACTCAATCCAAATTGACTTCAAGGAATTGTTCTAATCTCAGTAGGCAGAAGAGCTCCCCAGCTGGATTTCTCTCTAATTTCTCAGTTGAAAATGGTTTTGCTGGATTGAGAGAAGGGGCAAGTTTTAGAGCACGTGATGTCACAAACGGACAATCTGATGCTTCAACTAGTGGGTTGAATAGTCACATGAAATTCTCTTCTTGCTCGAGGCGAATGCCTCAGATTgctgaaaatggaaatgaaagcATGGAATCAAGCTGTGTTGACAGTAGAAACCTGGGAAATGATAACGGCAGCAGCAAATGTTTTGTGCCTAGTTTCACCAGTGACTTCTGGGACAGTTCTGCATTCAATGGCCAAAAAACAGCTAGTGACAATGATGAAATCATGTTCTCTACTTCAGGTGCCTTGGAAACTCAGGATTCAGATTTTGGATTCCAAAACCGTGGTTTAGCTCACCATTTGAGCTTGCCTAGTTCCTCCACCAAGATGACCATTGAGAAGTTTTTGCAAGTTCAAGGATCTGTTCCTTGTAAAATTCGAGCCAAACGAGGTTTTGCCACTCATCCAAGAAGCATTGCAGAGAGGGTAAGAAGAACCCGAATCAgtgaaagaataaagaaactGCATGATTTTTTCCCCAAATCAGATAAGCAAACAAGCACAGCAGATATGCTGGATTTGGCAGTTGACTATATCAAAGAACTGCAGAATCAAGTTAAGATGCTGACAGAGACCAAGGCAAAGTGCACGTGTTCAAGTAATCAAAAACAATATTCCAGAGCTAGTGTTTGtta 1274 0.4152 MSVLYSPTPKYSDGELKRNPEMGSSIGHPQQCHQPNSGLLRYRSAPSSFFANLVDNSNHGCLNEGAYGHSNYVSSSSAEMETMLAKLISSNNGWGNSASLNEHGEKPVKQEAGESVPPHNCYPYASQMIYQNQQVQGFPSANLSGGNAFDASFGVSENSTQSKLTSRNCSNLSRQKSSPAGFLSNFSVENGFAGLREGASFRARDVTNGQSDASTSGLNSHMKFSSCSRRMPQIAENGNESMESSCVDSRNLGNDNGSSKCFVPSFTSDFWDSSAFNGQKTASDNDEIMFSTSGALETQDSDFGFQNRGLAHHLSLPSSSTKMTIEKFLQVQGSVPCKIRAKRGFATHPRSIAERVRRTRISERIKKLHDFFPKSDKQTSTADMLDLAVDYIKELQNQVKMLTETKAKCTCSSNQKQYSRASVC 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01305 424 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 28 415 - -
Bva07g01305 424 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 348 409 IPR036638 GO:0046983
Bva07g01305 424 SMART finulus 351 401 IPR011598 GO:0046983
Bva07g01305 424 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 345 395 IPR011598 GO:0046983
Bva07g01305 424 Coils Coil 392 412 - -
Bva07g01305 424 Pfam Helix-loop-helix DNA-binding domain 351 396 IPR011598 GO:0046983
Bva07g01305 424 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 28 415 - -
Bva07g01305 424 MobiDBLite consensus disorder prediction 1 34 - -
Bva07g01305 424 Gene3D - 347 419 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01305 Bva-Chr7 13702634 13705178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01305 28 413 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 36.318 1.64e-52 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva07g01305 HLH 1.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01305 - - gmx:100812802 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01305 07 13702634 13705178 Bva09g01264 09 6834877 6837707 ECH
Bva07g01305 07 13702634 13705178 Bva07g01305 07 13702634 13705178 ECH