Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01288 ATGAATGATGGTAGACCAATGGAGGTGCATTACATAGATACTGGCTTTCCATATAATGTTACTGAAAGCTTCATGGACTTCTTTGAAGGCCTCACTCACATGCCTGTAAATTATGCTCATGCTGAAACAATGCCTGATCAgGAAAGTGTCTACTGGTCAATGAATATGAACCCATATAAATTTGGATTTCCTGGTCCTGGGAGTACATCTTACTATGGTTCTTATGATGTAAATTATCACTTTCCAAGAATAGAAATCAACAGGGCTGAGTGGGATTATCCTTCTGCCATGACCCTTGAGGTGCCAGTTACAACAGACTCCCCATCCACAAGAGACGGAGATACGGCCATGCATACTATCCCTGAAGAATgcAGTCCAAATCACCAGGACTCCAGTACCTCCCAGGTTGTATGGCAGGACAACATCGATCCTGATAACATGACTTATGAGGAATTAATGGACTTGGGCGAGGCTGTTGGAACTCAAAGTCGAGGCCTTTCACAAGATCTTATTGATTTACTTCCTACCTCAAAGTATAAATTTGGAGACTTattcaagagaaaaaactCTGGAAAGAGGTGTGTGGTATGTCAGATGACATACAGAAGAGGTGACCGACAGATGACGCTACCTTGCAGTCATGTTTACCACAGCGAGTGCATCACAAAATGGCTTAGCATTAACAAGAAATGCCCAGTTTGCAGCATCGAGGTATTTGGCGAGGAATCAACAAGCTA 737 0.4179 MNDGRPMEVHYIDTGFPYNVTESFMDFFEGLTHMPVNYAHAETMPDQESVYWSMNMNPYKFGFPGPGSTSYYGSYDVNYHFPRIEINRAEWDYPSAMTLEVPVTTDSPSTRDGDTAMHTIPEECSPNHQDSSTSQVVWQDNIDPDNMTYEELMDLGEAVGTQSRGLSQDLIDLLPTSKYKFGDLFKRKNSGKRCVVCQMTYRRGDRQMTLPCSHVYHSECITKWLSINKKCPVCSIEVFGEESTS 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01288 245 SMART ring_2 194 234 IPR001841 -
Bva07g01288 245 Pfam Ring finger domain 193 234 IPR001841 -
Bva07g01288 245 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 155 239 IPR013083 -
Bva07g01288 245 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 244 IPR033276 GO:0004842|GO:0016567|GO:0046621
Bva07g01288 245 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BIG BROTHER 1 244 - -
Bva07g01288 245 SUPERFAMILY RING/U-box 193 239 - -
Bva07g01288 245 ProSiteProfiles Zinc finger RING-type profile. 194 235 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01288 Bva-Chr7 13616085 13621053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01288 3 243 C3H Transcription Factor Family AT3G63530 58.848 5.20e-106 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01288 K19045 - gmx:100792734 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01288 07 13616085 13621053 Bva09g01279 09 6921577 6926522 ECH
Bva07g01288 07 13616085 13621053 Bva07g01288 07 13616085 13621053 ECH