Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01270 ATGGAGGCCGCCGCCGTCGTCGACCCCGGTTCGAAGCTCCTCAAAGCTGGATTCGCAATTCCTGACCAGGCCCCTGCTATGATGATACCTACTCAGATGAAACGTATGCTTGATGATGGATCGGTGACTGATAATTCATTAACTGATGATGTTACCATTGATCCAATTGTCCGAGGGTTTATCAGAGACTGGGATGCCGTGGAGGATTTGTTGCACCATGTTTTATATACTGGCCTTGGATGGGAGATAGGCAATGAAGGACAAATACTATTTACAGATACACTTTGTACCCCAAAGGCTAACAAAGAACAGTTAGTGCAACTAATGTTTGAAACATTCAACATATCGGGTTTTTACGCCTCTGAACAAGCAGTTTTATCACTCTATGCTGTGGGACGTATCTCAGGATGCACTGTTGATATTGGTCATGGTAAAATAGATATTGCACCAGTAATTGAGGGTGCTGTTCACCACATTGCCTCGAGAAGATTTGAGTTTGGAGGTGTTGATCTAACAAATTTCCTCGCTCAGGAACTTGGCAAATCCAATCCACGAGTAAATCTCAGCATGTATGatgttgagaaaataaaagagcaaTACTCATGTTGTGCCGAAGATGAATTAGCATATCAGAAGACCCAAGATTCTTGTCCACTGGAGAAGCATACCCTTCCTGATGGACAGGTGATTACAATaggaagagaaagatataGTGTTGGTGAAGCTTTATTCCAGCCCTCCTTGTTGGGTTTAGAGACTCATGGTATTGTTGAGCAGCTTGTTCGTACTATTTCAACTGTGACATCTGATAATCACCGGCAACTGCTGGAAAATACTGTGCTTTGCGGTGGAACTTCTTCTATGACTGGTTTTGAAGATAGGTTTCAGAAGGAATCCTGCCTCTGTTCATCTGCTATTCGACCTACCCTGGTTAAGCCTCCAGAATATATGCcagaaaatttgaatatgtaTTCAGCATGGGTGGGAGGTGCCATACTTGCCAAAGTAGTTTTCCCTCAAAATCAGCATGTAACTAAAGCAGACTATGACGAAAGTGGACCTTCCATTGTTCACCGGAAATGCTTCTG 1088 0.4164 MEAAAVVDPGSKLLKAGFAIPDQAPAMMIPTQMKRMLDDGSVTDNSLTDDVTIDPIVRGFIRDWDAVEDLLHHVLYTGLGWEIGNEGQILFTDTLCTPKANKEQLVQLMFETFNISGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVHHIASRRFEFGGVDLTNFLAQELGKSNPRVNLSMYDVEKIKEQYSCCAEDELAYQKTQDSCPLEKHTLPDGQVITIGRERYSVGEALFQPSLLGLETHGIVEQLVRTISTVTSDNHRQLLENTVLCGGTSSMTGFEDRFQKESCLCSSAIRPTLVKPPEYMPENLNMYSAWVGGAILAKVVFPQNQHVTKADYDESGPSIVHRKCF 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01270 362 Gene3D - 124 325 - -
Bva07g01270 362 Gene3D - 6 356 - -
Bva07g01270 362 PANTHER BNACNNG31150D PROTEIN 5 361 - -
Bva07g01270 362 SUPERFAMILY Actin-like ATPase domain 132 362 IPR043129 -
Bva07g01270 362 SUPERFAMILY Actin-like ATPase domain 4 139 IPR043129 -
Bva07g01270 362 CDD NBD_sugar-kinase_HSP70_actin 5 167 - -
Bva07g01270 362 Gene3D Actin; Chain A, domain 4 166 253 - -
Bva07g01270 362 PANTHER ACTIN 5 361 IPR004000 -
Bva07g01270 362 PRINTS Actin signature 101 114 IPR004000 -
Bva07g01270 362 PRINTS Actin signature 126 145 IPR004000 -
Bva07g01270 362 PRINTS Actin signature 24 33 IPR004000 -
Bva07g01270 362 PRINTS Actin signature 218 234 IPR004000 -
Bva07g01270 362 Pfam Actin 3 362 IPR004000 -
Bva07g01270 362 SMART actin_3 2 362 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01270 Bva-Chr7 13509533 13513935 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01270 6 362 Cytoskeleton Gene Families AT3G12110 38.933 2.22e-73 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01270 K16615 - gmx:100813266 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01270 07 13509533 13513935 Bva07g01270 07 13509533 13513935 ECH