Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01264 ATGGATCTTGACGACCTTGAACTCGAACCCTGGTGCGATGCCATCCCGATGGAGATTCACAGTGACGATTCTGACCTTGAAGAAGCGGACCCATCTCCTCATCATCAAAACGTACCGTGTTATCGCCTCACCGTGGAACTAAACGGGGACTCTACAACACTCCACTCTTTCCATATCCCAAAGCACGAACTGCTGTGCGAGGAAACGGCGTCGTTCCGGAACCCCATACTGGACAAGCTCGCTCAAATGGGTGTCCCCCAGAATTCTCAGAACGTCATGAAAGAAAGGATACTAGCATGTGCACGTGACATGGCCAGATGGACGCACGTGACCCACAAGGTTCTCCCCATGTTTGTGACCATATCACTCACTGGAATGGCCAATGACGAGAATGATGGTGATGACGACGACGAGGATGGCATGGTATATATGGAGGACGATCAGGGACATTATGGTCAAGCGCGGGTGCCTGCAAGTGAAGCTTCCATTGAGAGATTGGACAGCGTGGTGTTTGGACAAGATGAAGTTGATGATGGGTTTGTATCTGGTATAGGAGGGTGCAGCATCTGTTTGGAAGACTTTAAGGTTGGTTCACAAGTTACTAGGATGCCATGTTTGCATCTTTATCATAGGAACTGCATTGTCGATTGGCTGAGACAGACCAATTCCTGTCCCTTGTGTCGGTTTCTAATGCCTCCTGCGGCTACCACTGAGGGAAAGTA 722 0.4972 MFVTISLTGMANDENDGDDDDEDGMVYMEDDQGHYGQARVPASEASIERLDSVVFGQDEVDDGFVSGIGGCSICLEDFKVGSQVTRMPCLHLYHRNCIVDWLRQTNSCPLCRFLMPPAATTEGK 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01264 124 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 32 116 - -
Bva07g01264 124 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 27 118 IPR013083 -
Bva07g01264 124 MobiDBLite consensus disorder prediction 13 27 - -
Bva07g01264 124 ProSiteProfiles Zinc finger RING-type profile. 71 112 IPR001841 -
Bva07g01264 124 CDD RING-H2_PA-TM-RING 71 112 - -
Bva07g01264 124 SMART ring_2 71 111 IPR001841 -
Bva07g01264 124 SUPERFAMILY RING/U-box 55 117 - -
Bva07g01264 124 Pfam Ring finger domain 71 112 IPR001841 -
Bva07g01264 124 MobiDBLite consensus disorder prediction 1 28 - -
Bva07g01264 124 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 32 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01264 Bva-Chr7 13482322 13483044 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01264 15 116 C3H Transcription Factor Family AT5G01980 40.187 1.04e-18 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01264 - K22378 qlo:115951765 88.9669