Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01263 ATGGAATATTACAGCGATGAAGTTGAACACTACTGCGAAGCTTTCCCACTGGACacagaagaagaacaagaagaagaaacggCGTCGTCTTCGGAGCAATACTTCAACATCAAGTTCGAAGTGAGAGTGACGGACGGGGACTGCCATCCCCACGGCGAAGAACCTGATATCTTGGTGGCCGGTTACTCTAACCCCGCCGAATACTTCTTCCCAATCATTCCGAGGGAATCTCTCTTCAAAGAACAAGAAACGACGCCGTTGTCCTCGTCGGAATCCGTACTGTTAAACATGCTCTCTCAGATGGGTGTCCCTCACAATGCTCAGAACTTCATGGCAGCCAAGATCTTGGCCTGTGCACGCGACATGGTTTACAGGACCCACAAGGTTCTTTCCATTGCTGTGCAGATTTTCCTCACCAGGGTCAACGAAGATGAAGAACAAGAACCAATCTTTGATGAAGACGAAGAAGATGAAGCTGTGGATATGGATCAGGGTCAAGATCATGACGAGTTGGTGCCTGCAACGAAGGCTTCTATAGAGCAACTGGAGAGTCTCGAGGTTGAAGGAGAAGAACAGAAGTGTGCGATTTGTTTGGAAGATTTTATTGTCGGCTTACGAGTTACTAGGATGCCTTGTTTGCATTTGTACCATGAAAACTGCATTGTGGATTGGCTGCGTAAGGGGAATTCATGCCCGTTGTGTAGGTTCATGATGCCTGCTACTACAAGTGCAACTGGATG 740 0.4608 MEYYSDEVEHYCEAFPLDTEEEQEEETASSSEQYFNIKFEVRVTDGDCHPHGEEPDILVAGYSNPAEYFFPIIPRESLFKEQETTPLSSSESVLLNMLSQMGVPHNAQNFMAAKILACARDMVYRTHKVLSIAVQIFLTRVNEDEEQEPIFDEDEEDEAVDMDQGQDHDELVPATKASIEQLESLEVEGEEQKCAICLEDFIVGLRVTRMPCLHLYHENCIVDWLRKGNSCPLCRFMMPATTSATG 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01263 246 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 88 239 - -
Bva07g01263 246 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 88 239 - -
Bva07g01263 246 CDD RING-H2_PA-TM-RING 194 235 - -
Bva07g01263 246 Pfam Ring finger domain 193 235 IPR001841 -
Bva07g01263 246 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 158 241 IPR013083 -
Bva07g01263 246 SUPERFAMILY RING/U-box 187 240 - -
Bva07g01263 246 ProSiteProfiles Zinc finger RING-type profile. 194 235 IPR001841 -
Bva07g01263 246 SMART ring_2 194 234 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01263 Bva-Chr7 13481036 13481776 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01263 151 243 C3H Transcription Factor Family AT2G44330 44.086 3.34e-17 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01263 - - mtr:MTR_5g062820 129.413